Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC17.38■□□□□ 0.37
USP8P40818 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP8P40818 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP8P40818 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.38■□□□□ 0.37
USP8P40818 AC097376.2-205ENST00000610159 5334 ntBASIC17.38■□□□□ 0.37
USP8P40818 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
USP8P40818 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.38■□□□□ 0.37
USP8P40818 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP8P40818 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USP8P40818 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.38■□□□□ 0.37
USP8P40818 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USP8P40818 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USP8P40818 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP8P40818 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP8P40818 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USP8P40818 SPCS2P4-201ENST00000436160 681 ntBASIC17.38■□□□□ 0.37
USP8P40818 ACTG1P14-201ENST00000446382 1122 ntBASIC17.38■□□□□ 0.37
USP8P40818 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
USP8P40818 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.38■□□□□ 0.37
USP8P40818 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.38■□□□□ 0.37
USP8P40818 RNA5SP410-201ENST00000516285 106 ntBASIC17.38■□□□□ 0.37
USP8P40818 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.38■□□□□ 0.37
USP8P40818 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.38■□□□□ 0.37
USP8P40818 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.38■□□□□ 0.37
USP8P40818 AC005829.1-201ENST00000570002 483 ntBASIC17.38■□□□□ 0.37
USP8P40818 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.38■□□□□ 0.37
USP8P40818 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.38■□□□□ 0.37
USP8P40818 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.38■□□□□ 0.37
USP8P40818 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USP8P40818 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.38■□□□□ 0.37
USP8P40818 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.38■□□□□ 0.37
USP8P40818 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USP8P40818 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP8P40818 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.38■□□□□ 0.37
USP8P40818 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
USP8P40818 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC17.38■□□□□ 0.37
USP8P40818 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
USP8P40818 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USP8P40818 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.38■□□□□ 0.37
USP8P40818 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USP8P40818 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP8P40818 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
USP8P40818 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.38■□□□□ 0.37
USP8P40818 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USP8P40818 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP8P40818 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP8P40818 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP8P40818 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP8P40818 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP8P40818 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC17.37■□□□□ 0.37
USP8P40818 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP8P40818 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP8P40818 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP8P40818 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP8P40818 FOXO1B-201ENST00000504678 1527 ntBASIC17.37■□□□□ 0.37
USP8P40818 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
USP8P40818 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP8P40818 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.37■□□□□ 0.37
USP8P40818 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP8P40818 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP8P40818 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
USP8P40818 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP8P40818 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP8P40818 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP8P40818 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP8P40818 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.37■□□□□ 0.37
USP8P40818 MKNK2P1-201ENST00000437526 628 ntBASIC17.37■□□□□ 0.37
USP8P40818 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.37■□□□□ 0.37
USP8P40818 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.37■□□□□ 0.37
USP8P40818 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
USP8P40818 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.37■□□□□ 0.37
USP8P40818 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.37■□□□□ 0.37
USP8P40818 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.37■□□□□ 0.37
USP8P40818 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.37■□□□□ 0.37
USP8P40818 AC010327.4-202ENST00000591484 748 ntBASIC17.37■□□□□ 0.37
USP8P40818 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.37■□□□□ 0.37
USP8P40818 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
USP8P40818 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
USP8P40818 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP8P40818 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP8P40818 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP8P40818 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
USP8P40818 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.37■□□□□ 0.37
USP8P40818 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.37■□□□□ 0.37
USP8P40818 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.37■□□□□ 0.37
USP8P40818 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
USP8P40818 AP005117.1-202ENST00000581724 1908 ntBASIC17.37■□□□□ 0.37
USP8P40818 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.37■□□□□ 0.37
USP8P40818 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP8P40818 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.37■□□□□ 0.37
USP8P40818 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC17.37■□□□□ 0.37
USP8P40818 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.37■□□□□ 0.37
USP8P40818 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP8P40818 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP8P40818 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP8P40818 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP8P40818 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP8P40818 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP8P40818 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP8P40818 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms