Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCND1P24385 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.06■□□□□ 0.16
CCND1P24385 AC002056.1-201ENST00000395613 760 ntBASIC16.06■□□□□ 0.16
CCND1P24385 AC092474.2-201ENST00000424288 719 ntBASIC16.06■□□□□ 0.16
CCND1P24385 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.06■□□□□ 0.16
CCND1P24385 POU5F1P6-201ENST00000466990 990 ntBASIC16.06■□□□□ 0.16
CCND1P24385 AC112191.1-201ENST00000523689 701 ntBASIC16.06■□□□□ 0.16
CCND1P24385 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.06■□□□□ 0.16
CCND1P24385 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCND1P24385 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.06■□□□□ 0.16
CCND1P24385 AC002347.1-201ENST00000569543 541 ntBASIC16.06■□□□□ 0.16
CCND1P24385 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.06■□□□□ 0.16
CCND1P24385 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCND1P24385 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCND1P24385 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCND1P24385 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCND1P24385 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCND1P24385 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCND1P24385 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCND1P24385 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CCND1P24385 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.06■□□□□ 0.16
CCND1P24385 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCND1P24385 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.06■□□□□ 0.16
CCND1P24385 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCND1P24385 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCND1P24385 AL390755.1-201ENST00000623716 2027 ntBASIC16.06■□□□□ 0.16
CCND1P24385 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CCND1P24385 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CCND1P24385 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.05■□□□□ 0.16
CCND1P24385 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCND1P24385 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCND1P24385 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.05■□□□□ 0.16
CCND1P24385 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CCND1P24385 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.05■□□□□ 0.16
CCND1P24385 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCND1P24385 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCND1P24385 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CCND1P24385 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CCND1P24385 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCND1P24385 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CCND1P24385 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CCND1P24385 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.05■□□□□ 0.16
CCND1P24385 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CCND1P24385 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CCND1P24385 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.05■□□□□ 0.16
CCND1P24385 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.05■□□□□ 0.16
CCND1P24385 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.05■□□□□ 0.16
CCND1P24385 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.05■□□□□ 0.16
CCND1P24385 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.05■□□□□ 0.16
CCND1P24385 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.05■□□□□ 0.16
CCND1P24385 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CCND1P24385 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.05■□□□□ 0.16
CCND1P24385 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CCND1P24385 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCND1P24385 LINC00552-201ENST00000625151 2579 ntBASIC16.05■□□□□ 0.16
CCND1P24385 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CCND1P24385 AC005912.2-201ENST00000619492 2400 ntBASIC16.05■□□□□ 0.16
CCND1P24385 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.05■□□□□ 0.16
CCND1P24385 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.05■□□□□ 0.16
CCND1P24385 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.05■□□□□ 0.16
CCND1P24385 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCND1P24385 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCND1P24385 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
CCND1P24385 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
CCND1P24385 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CCND1P24385 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCND1P24385 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CCND1P24385 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCND1P24385 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCND1P24385 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCND1P24385 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCND1P24385 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
CCND1P24385 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.04■□□□□ 0.16
CCND1P24385 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCND1P24385 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.04■□□□□ 0.16
CCND1P24385 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.04■□□□□ 0.16
CCND1P24385 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.04■□□□□ 0.16
CCND1P24385 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.04■□□□□ 0.16
CCND1P24385 AL513190.1-201ENST00000621254 727 ntBASIC16.04■□□□□ 0.16
CCND1P24385 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.04■□□□□ 0.16
CCND1P24385 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.04■□□□□ 0.16
CCND1P24385 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.04■□□□□ 0.16
CCND1P24385 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CCND1P24385 AC069224.1-201ENST00000566372 1715 ntBASIC16.04■□□□□ 0.16
CCND1P24385 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.04■□□□□ 0.16
CCND1P24385 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CCND1P24385 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCND1P24385 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCND1P24385 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCND1P24385 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCND1P24385 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCND1P24385 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCND1P24385 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCND1P24385 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCND1P24385 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.04■□□□□ 0.16
CCND1P24385 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCND1P24385 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCND1P24385 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCND1P24385 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCND1P24385 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms