Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KCNA3P22001 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNA3P22001 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KCNA3P22001 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
KCNA3P22001 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC19.11■□□□□ 0.65
KCNA3P22001 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNA3P22001 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNA3P22001 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
KCNA3P22001 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNA3P22001 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC19.11■□□□□ 0.65
KCNA3P22001 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC19.11■□□□□ 0.65
KCNA3P22001 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC19.11■□□□□ 0.65
KCNA3P22001 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC19.11■□□□□ 0.65
KCNA3P22001 RPL13AP19-201ENST00000434320 584 ntBASIC19.11■□□□□ 0.65
KCNA3P22001 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC19.11■□□□□ 0.65
KCNA3P22001 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC19.11■□□□□ 0.65
KCNA3P22001 AC234782.1-201ENST00000451950 919 ntBASIC19.11■□□□□ 0.65
KCNA3P22001 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC19.11■□□□□ 0.65
KCNA3P22001 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC19.11■□□□□ 0.65
KCNA3P22001 AC005740.2-201ENST00000511085 419 ntBASIC19.11■□□□□ 0.65
KCNA3P22001 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC19.11■□□□□ 0.65
KCNA3P22001 UBL5-208ENST00000593087 320 ntTSL 3 BASIC19.11■□□□□ 0.65
KCNA3P22001 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC19.11■□□□□ 0.65
KCNA3P22001 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC19.11■□□□□ 0.65
KCNA3P22001 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.11■□□□□ 0.65
KCNA3P22001 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KCNA3P22001 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KCNA3P22001 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNA3P22001 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KCNA3P22001 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
KCNA3P22001 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
KCNA3P22001 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNA3P22001 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KCNA3P22001 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNA3P22001 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNA3P22001 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNA3P22001 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC19.11■□□□□ 0.65
KCNA3P22001 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.11■□□□□ 0.65
KCNA3P22001 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
KCNA3P22001 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KCNA3P22001 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.1■□□□□ 0.65
KCNA3P22001 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC19.1■□□□□ 0.65
KCNA3P22001 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
KCNA3P22001 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KCNA3P22001 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
KCNA3P22001 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
KCNA3P22001 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.1■□□□□ 0.65
KCNA3P22001 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KCNA3P22001 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KCNA3P22001 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KCNA3P22001 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KCNA3P22001 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC19.1■□□□□ 0.65
KCNA3P22001 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC19.1■□□□□ 0.65
KCNA3P22001 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC19.1■□□□□ 0.65
KCNA3P22001 HIST2H2BB-201ENST00000449108 381 ntBASIC19.1■□□□□ 0.65
KCNA3P22001 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC19.1■□□□□ 0.65
KCNA3P22001 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
KCNA3P22001 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC19.1■□□□□ 0.65
KCNA3P22001 AC011491.1-203ENST00000637688 543 ntBASIC19.1■□□□□ 0.65
KCNA3P22001 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.1■□□□□ 0.65
KCNA3P22001 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.1■□□□□ 0.65
KCNA3P22001 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KCNA3P22001 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KCNA3P22001 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.1■□□□□ 0.65
KCNA3P22001 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KCNA3P22001 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KCNA3P22001 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
KCNA3P22001 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
KCNA3P22001 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
KCNA3P22001 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
KCNA3P22001 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
KCNA3P22001 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC19.09■□□□□ 0.65
KCNA3P22001 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KCNA3P22001 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KCNA3P22001 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KCNA3P22001 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
KCNA3P22001 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
KCNA3P22001 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KCNA3P22001 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KCNA3P22001 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KCNA3P22001 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KCNA3P22001 B9D1-203ENST00000395615 805 ntTSL 3 BASIC19.09■□□□□ 0.65
KCNA3P22001 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC19.09■□□□□ 0.65
KCNA3P22001 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC19.09■□□□□ 0.65
KCNA3P22001 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC19.09■□□□□ 0.65
KCNA3P22001 WDR7-208ENST00000589935 544 ntTSL 4 BASIC19.09■□□□□ 0.65
KCNA3P22001 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC19.09■□□□□ 0.65
KCNA3P22001 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.09■□□□□ 0.65
KCNA3P22001 ANKRD30BP2-201ENST00000435744 1610 ntBASIC19.09■□□□□ 0.65
KCNA3P22001 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.09■□□□□ 0.65
KCNA3P22001 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KCNA3P22001 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.09■□□□□ 0.65
KCNA3P22001 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
KCNA3P22001 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC19.08■□□□□ 0.65
KCNA3P22001 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
KCNA3P22001 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
KCNA3P22001 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
KCNA3P22001 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
KCNA3P22001 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
KCNA3P22001 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms