Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.05■□□□□ -0
NCK1P16333 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.05■□□□□ -0
NCK1P16333 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
NCK1P16333 MIR4751-201ENST00000578027 74 ntBASIC15.05■□□□□ -0
NCK1P16333 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NCK1P16333 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.05■□□□□ -0
NCK1P16333 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NCK1P16333 AL078644.1-201ENST00000609881 752 ntBASIC15.05■□□□□ -0
NCK1P16333 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.05■□□□□ -0
NCK1P16333 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
NCK1P16333 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NCK1P16333 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
NCK1P16333 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.05■□□□□ -0
NCK1P16333 AC127383.1-201ENST00000444697 1800 ntBASIC15.05■□□□□ -0
NCK1P16333 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.05■□□□□ -0
NCK1P16333 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
NCK1P16333 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NCK1P16333 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.05■□□□□ -0
NCK1P16333 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
NCK1P16333 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NCK1P16333 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NCK1P16333 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
NCK1P16333 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.04■□□□□ -0
NCK1P16333 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NCK1P16333 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NCK1P16333 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.04■□□□□ -0
NCK1P16333 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NCK1P16333 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NCK1P16333 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
NCK1P16333 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.04■□□□□ -0
NCK1P16333 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.04■□□□□ -0
NCK1P16333 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.04■□□□□ -0
NCK1P16333 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
NCK1P16333 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.04■□□□□ -0
NCK1P16333 MYO15B-237ENST00000642007 4893 ntBASIC15.04■□□□□ -0
NCK1P16333 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.04■□□□□ -0
NCK1P16333 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
NCK1P16333 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.04■□□□□ -0
NCK1P16333 WASH6P-202ENST00000359512 1437 ntBASIC15.04■□□□□ -0
NCK1P16333 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.04■□□□□ -0
NCK1P16333 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
NCK1P16333 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
NCK1P16333 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.04■□□□□ -0
NCK1P16333 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
NCK1P16333 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.04■□□□□ -0
NCK1P16333 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.04■□□□□ -0
NCK1P16333 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.04■□□□□ -0
NCK1P16333 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
NCK1P16333 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
NCK1P16333 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.04■□□□□ -0
NCK1P16333 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.04■□□□□ -0
NCK1P16333 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
NCK1P16333 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.04■□□□□ -0
NCK1P16333 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
NCK1P16333 MIR600HG-201ENST00000449175 5984 ntBASIC15.04■□□□□ -0
NCK1P16333 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NCK1P16333 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NCK1P16333 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.04■□□□□ -0
NCK1P16333 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.04■□□□□ -0
NCK1P16333 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.04■□□□□ -0
NCK1P16333 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.04■□□□□ -0
NCK1P16333 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NCK1P16333 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
NCK1P16333 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.04■□□□□ -0
NCK1P16333 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NCK1P16333 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.03■□□□□ -0
NCK1P16333 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.03■□□□□ -0
NCK1P16333 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NCK1P16333 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NCK1P16333 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
NCK1P16333 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.03■□□□□ -0
NCK1P16333 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.03■□□□□ -0
NCK1P16333 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NCK1P16333 AC117489.1-201ENST00000625169 3217 ntBASIC15.03■□□□□ -0
NCK1P16333 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NCK1P16333 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
NCK1P16333 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.03■□□□□ -0
NCK1P16333 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.03■□□□□ -0
NCK1P16333 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
NCK1P16333 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NCK1P16333 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
NCK1P16333 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NCK1P16333 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.03■□□□□ -0
NCK1P16333 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.03■□□□□ -0
NCK1P16333 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.03■□□□□ -0
NCK1P16333 AC002347.1-201ENST00000569543 541 ntBASIC15.03■□□□□ -0
NCK1P16333 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.03■□□□□ -0
NCK1P16333 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.03■□□□□ -0
NCK1P16333 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.03■□□□□ -0
NCK1P16333 LINC01711-201ENST00000598340 967 ntBASIC15.03■□□□□ -0
NCK1P16333 AL009183.1-201ENST00000603760 355 ntBASIC15.03■□□□□ -0
NCK1P16333 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NCK1P16333 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.03■□□□□ -0
NCK1P16333 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
NCK1P16333 AL390755.1-201ENST00000623716 2027 ntBASIC15.03■□□□□ -0
NCK1P16333 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.03■□□□□ -0
NCK1P16333 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NCK1P16333 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NCK1P16333 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NCK1P16333 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms