Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 AL590627.1-203ENST00000421194 1026 ntBASIC15.43■□□□□ 0.06
LINGO3P0C6S8 AC145285.3-201ENST00000564603 959 ntBASIC15.43■□□□□ 0.06
LINGO3P0C6S8 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 AC004790.2-201ENST00000623588 572 ntBASIC15.43■□□□□ 0.06
LINGO3P0C6S8 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 AC118758.2-201ENST00000614242 2813 ntBASIC15.43■□□□□ 0.06
LINGO3P0C6S8 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 AC006277.1-201ENST00000624348 1610 ntBASIC15.43■□□□□ 0.06
LINGO3P0C6S8 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
LINGO3P0C6S8 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 AP003680.1-201ENST00000598970 3660 ntBASIC15.42■□□□□ 0.06
LINGO3P0C6S8 Z82170.1-201ENST00000625081 3192 ntBASIC15.42■□□□□ 0.06
LINGO3P0C6S8 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 MRPL20P1-201ENST00000400819 433 ntBASIC15.42■□□□□ 0.06
LINGO3P0C6S8 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 OR7E47P-204ENST00000575924 449 ntBASIC15.42■□□□□ 0.06
LINGO3P0C6S8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 Z83851.2-201ENST00000609564 659 ntBASIC15.42■□□□□ 0.06
LINGO3P0C6S8 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 REXO1L3P-201ENST00000622202 1288 ntBASIC15.42■□□□□ 0.06
LINGO3P0C6S8 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.42■□□□□ 0.06
LINGO3P0C6S8 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms