Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 KRT8P12-202ENST00000472924 1397 ntBASIC16.42■□□□□ 0.22
CD48P09326 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD48P09326 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CD48P09326 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CD48P09326 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD48P09326 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD48P09326 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CD48P09326 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD48P09326 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
CD48P09326 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CD48P09326 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD48P09326 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.42■□□□□ 0.22
CD48P09326 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CD48P09326 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD48P09326 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD48P09326 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD48P09326 SPDYE7P-202ENST00000420373 878 ntBASIC16.42■□□□□ 0.22
CD48P09326 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.42■□□□□ 0.22
CD48P09326 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.42■□□□□ 0.22
CD48P09326 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.42■□□□□ 0.22
CD48P09326 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.42■□□□□ 0.22
CD48P09326 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CD48P09326 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.42■□□□□ 0.22
CD48P09326 AL079307.3-201ENST00000556114 283 ntBASIC16.42■□□□□ 0.22
CD48P09326 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CD48P09326 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD48P09326 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.42■□□□□ 0.22
CD48P09326 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.42■□□□□ 0.22
CD48P09326 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.42■□□□□ 0.22
CD48P09326 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CD48P09326 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CD48P09326 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
CD48P09326 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CD48P09326 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD48P09326 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.42■□□□□ 0.22
CD48P09326 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD48P09326 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CD48P09326 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD48P09326 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD48P09326 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CD48P09326 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.41■□□□□ 0.22
CD48P09326 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.41■□□□□ 0.22
CD48P09326 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CD48P09326 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.41■□□□□ 0.22
CD48P09326 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD48P09326 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD48P09326 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD48P09326 AC091951.1-201ENST00000512854 2465 ntBASIC16.41■□□□□ 0.22
CD48P09326 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CD48P09326 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD48P09326 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.41■□□□□ 0.22
CD48P09326 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.41■□□□□ 0.22
CD48P09326 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CD48P09326 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD48P09326 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CD48P09326 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CD48P09326 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CD48P09326 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CD48P09326 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD48P09326 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CD48P09326 TSEN15P1-201ENST00000423257 515 ntBASIC16.41■□□□□ 0.22
CD48P09326 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.41■□□□□ 0.22
CD48P09326 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.41■□□□□ 0.22
CD48P09326 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.41■□□□□ 0.22
CD48P09326 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD48P09326 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.41■□□□□ 0.22
CD48P09326 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.41■□□□□ 0.22
CD48P09326 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.41■□□□□ 0.22
CD48P09326 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CD48P09326 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.41■□□□□ 0.22
CD48P09326 Z92544.3-201ENST00000624747 417 ntBASIC16.41■□□□□ 0.22
CD48P09326 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD48P09326 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CD48P09326 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CD48P09326 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD48P09326 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.41■□□□□ 0.22
CD48P09326 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CD48P09326 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD48P09326 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD48P09326 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD48P09326 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD48P09326 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CD48P09326 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD48P09326 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CD48P09326 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD48P09326 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD48P09326 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD48P09326 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD48P09326 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.4■□□□□ 0.22
CD48P09326 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD48P09326 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.4■□□□□ 0.22
CD48P09326 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CD48P09326 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD48P09326 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD48P09326 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD48P09326 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.4■□□□□ 0.22
CD48P09326 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CD48P09326 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CD48P09326 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.4■□□□□ 0.22
CD48P09326 AL080243.2-201ENST00000418783 582 ntBASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms