Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC18.98■□□□□ 0.63
COL4A1P02462 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
COL4A1P02462 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.98■□□□□ 0.63
COL4A1P02462 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL4A1P02462 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL4A1P02462 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.98■□□□□ 0.63
COL4A1P02462 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
COL4A1P02462 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC18.98■□□□□ 0.63
COL4A1P02462 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL4A1P02462 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL4A1P02462 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.98■□□□□ 0.63
COL4A1P02462 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL4A1P02462 AHCYP2-201ENST00000430630 1300 ntBASIC18.98■□□□□ 0.63
COL4A1P02462 AL354989.2-201ENST00000435838 1540 ntBASIC18.98■□□□□ 0.63
COL4A1P02462 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
COL4A1P02462 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL4A1P02462 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL4A1P02462 MPV17-205ENST00000402310 906 ntTSL 5 BASIC18.98■□□□□ 0.63
COL4A1P02462 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC18.98■□□□□ 0.63
COL4A1P02462 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL4A1P02462 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC18.98■□□□□ 0.63
COL4A1P02462 RNF41-210ENST00000552244 716 ntTSL 3 BASIC18.98■□□□□ 0.63
COL4A1P02462 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC18.98■□□□□ 0.63
COL4A1P02462 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
COL4A1P02462 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC18.98■□□□□ 0.63
COL4A1P02462 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL4A1P02462 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL4A1P02462 CYP2T1P-202ENST00000641596 2535 ntBASIC18.98■□□□□ 0.63
COL4A1P02462 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
COL4A1P02462 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL4A1P02462 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
COL4A1P02462 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL4A1P02462 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.97■□□□□ 0.63
COL4A1P02462 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL4A1P02462 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
COL4A1P02462 AC007787.1-201ENST00000588095 1583 ntBASIC18.97■□□□□ 0.63
COL4A1P02462 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL4A1P02462 GRN-222ENST00000639447 1314 ntTSL 2 BASIC18.97■□□□□ 0.63
COL4A1P02462 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
COL4A1P02462 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL4A1P02462 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
COL4A1P02462 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL4A1P02462 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL4A1P02462 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL4A1P02462 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL4A1P02462 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL4A1P02462 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
COL4A1P02462 B9D1-203ENST00000395615 805 ntTSL 3 BASIC18.97■□□□□ 0.63
COL4A1P02462 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC18.97■□□□□ 0.63
COL4A1P02462 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC18.97■□□□□ 0.63
COL4A1P02462 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL4A1P02462 AL391280.1-201ENST00000506969 1062 ntBASIC18.97■□□□□ 0.63
COL4A1P02462 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.97■□□□□ 0.63
COL4A1P02462 MIR4783-201ENST00000580343 82 ntBASIC18.97■□□□□ 0.63
COL4A1P02462 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL4A1P02462 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL4A1P02462 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL4A1P02462 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
COL4A1P02462 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL4A1P02462 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL4A1P02462 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
COL4A1P02462 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.97■□□□□ 0.63
COL4A1P02462 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
COL4A1P02462 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.97■□□□□ 0.63
COL4A1P02462 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.96■□□□□ 0.63
COL4A1P02462 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A1P02462 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A1P02462 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC18.96■□□□□ 0.63
COL4A1P02462 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A1P02462 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.96■□□□□ 0.63
COL4A1P02462 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A1P02462 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
COL4A1P02462 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A1P02462 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A1P02462 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A1P02462 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.96■□□□□ 0.63
COL4A1P02462 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC18.96■□□□□ 0.63
COL4A1P02462 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
COL4A1P02462 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A1P02462 AC103810.3-201ENST00000583567 96 ntBASIC18.96■□□□□ 0.63
COL4A1P02462 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A1P02462 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
COL4A1P02462 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A1P02462 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.96■□□□□ 0.63
COL4A1P02462 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A1P02462 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.96■□□□□ 0.63
COL4A1P02462 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A1P02462 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A1P02462 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A1P02462 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.96■□□□□ 0.63
COL4A1P02462 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
COL4A1P02462 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A1P02462 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
COL4A1P02462 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.96■□□□□ 0.62
COL4A1P02462 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.96■□□□□ 0.62
COL4A1P02462 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
COL4A1P02462 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
COL4A1P02462 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
COL4A1P02462 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
COL4A1P02462 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms