Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CUX2O14529 PCDHB18P-201ENST00000524813 2368 ntBASIC26.48■■□□□ 1.83
CUX2O14529 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CUX2O14529 LYPLA2P1-203ENST00000447689 696 ntBASIC26.48■■□□□ 1.83
CUX2O14529 IGHEP1-201ENST00000521393 651 ntBASIC26.48■■□□□ 1.83
CUX2O14529 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC26.48■■□□□ 1.83
CUX2O14529 AC005324.6-201ENST00000587972 613 ntBASIC26.48■■□□□ 1.83
CUX2O14529 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC26.48■■□□□ 1.83
CUX2O14529 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CUX2O14529 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC26.48■■□□□ 1.83
CUX2O14529 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CUX2O14529 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CUX2O14529 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
CUX2O14529 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CUX2O14529 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CUX2O14529 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CUX2O14529 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CUX2O14529 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CUX2O14529 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC26.47■■□□□ 1.83
CUX2O14529 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
CUX2O14529 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CUX2O14529 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
CUX2O14529 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
CUX2O14529 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
CUX2O14529 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CUX2O14529 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CUX2O14529 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CUX2O14529 RN7SL67P-201ENST00000492147 296 ntBASIC26.47■■□□□ 1.83
CUX2O14529 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC26.47■■□□□ 1.83
CUX2O14529 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC26.47■■□□□ 1.83
CUX2O14529 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC26.47■■□□□ 1.83
CUX2O14529 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CUX2O14529 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CUX2O14529 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CUX2O14529 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
CUX2O14529 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC26.46■■□□□ 1.83
CUX2O14529 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CUX2O14529 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC26.46■■□□□ 1.83
CUX2O14529 RN7SKP214-201ENST00000364208 315 ntBASIC26.46■■□□□ 1.83
CUX2O14529 COX20P1-201ENST00000366529 357 ntBASIC26.46■■□□□ 1.83
CUX2O14529 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CUX2O14529 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
CUX2O14529 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC26.46■■□□□ 1.83
CUX2O14529 HNRNPA1P58-201ENST00000403629 610 ntBASIC26.46■■□□□ 1.83
CUX2O14529 POM121L8P-201ENST00000417732 1281 ntBASIC26.46■■□□□ 1.83
CUX2O14529 POM121L9P-203ENST00000441984 1285 ntBASIC26.46■■□□□ 1.83
CUX2O14529 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC26.46■■□□□ 1.83
CUX2O14529 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC26.46■■□□□ 1.83
CUX2O14529 AC090164.2-201ENST00000611487 516 ntBASIC26.46■■□□□ 1.83
CUX2O14529 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CUX2O14529 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CUX2O14529 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CUX2O14529 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC26.45■■□□□ 1.83
CUX2O14529 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CUX2O14529 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
CUX2O14529 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
CUX2O14529 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CUX2O14529 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CUX2O14529 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC26.45■■□□□ 1.82
CUX2O14529 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
CUX2O14529 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CUX2O14529 AC097359.3-201ENST00000603982 1210 ntBASIC26.45■■□□□ 1.82
CUX2O14529 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC26.45■■□□□ 1.82
CUX2O14529 DDX5-235ENST00000630471 473 ntTSL 4 BASIC26.45■■□□□ 1.82
CUX2O14529 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.82
CUX2O14529 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CUX2O14529 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
CUX2O14529 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CUX2O14529 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC26.44■■□□□ 1.82
CUX2O14529 ANKRD30BP2-201ENST00000435744 1610 ntBASIC26.44■■□□□ 1.82
CUX2O14529 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC26.44■■□□□ 1.82
CUX2O14529 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
CUX2O14529 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
CUX2O14529 SNX15-201ENST00000352068 771 ntTSL 5 BASIC26.44■■□□□ 1.82
CUX2O14529 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC26.44■■□□□ 1.82
CUX2O14529 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC26.44■■□□□ 1.82
CUX2O14529 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC26.44■■□□□ 1.82
CUX2O14529 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC26.44■■□□□ 1.82
CUX2O14529 AL136295.7-201ENST00000619226 1200 ntBASIC26.44■■□□□ 1.82
CUX2O14529 PCBP2-OT1-201ENST00000634357 590 ntBASIC26.44■■□□□ 1.82
CUX2O14529 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CUX2O14529 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CUX2O14529 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CUX2O14529 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
CUX2O14529 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CUX2O14529 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
CUX2O14529 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CUX2O14529 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
CUX2O14529 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
CUX2O14529 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC26.44■■□□□ 1.82
CUX2O14529 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
CUX2O14529 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
CUX2O14529 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CUX2O14529 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
CUX2O14529 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC26.43■■□□□ 1.82
CUX2O14529 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC26.43■■□□□ 1.82
CUX2O14529 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
CUX2O14529 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC26.43■■□□□ 1.82
CUX2O14529 PAM16-211ENST00000575848 518 ntTSL 3 BASIC26.43■■□□□ 1.82
CUX2O14529 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms