Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHL1O00533 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CHL1O00533 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC20.17■□□□□ 0.82
CHL1O00533 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC20.17■□□□□ 0.82
CHL1O00533 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
CHL1O00533 AC107373.2-201ENST00000607735 490 ntBASIC20.17■□□□□ 0.82
CHL1O00533 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC20.17■□□□□ 0.82
CHL1O00533 CU634019.7-201ENST00000624153 1185 ntBASIC20.17■□□□□ 0.82
CHL1O00533 FP236241.2-201ENST00000624906 1185 ntBASIC20.17■□□□□ 0.82
CHL1O00533 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC20.17■□□□□ 0.82
CHL1O00533 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.17■□□□□ 0.82
CHL1O00533 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHL1O00533 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CHL1O00533 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHL1O00533 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHL1O00533 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHL1O00533 AC008894.3-201ENST00000624324 3103 ntBASIC20.17■□□□□ 0.82
CHL1O00533 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CHL1O00533 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHL1O00533 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHL1O00533 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHL1O00533 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CHL1O00533 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHL1O00533 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHL1O00533 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHL1O00533 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHL1O00533 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHL1O00533 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHL1O00533 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHL1O00533 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHL1O00533 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC20.16■□□□□ 0.82
CHL1O00533 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
CHL1O00533 MXI1-205ENST00000393134 889 ntTSL 2 BASIC20.16■□□□□ 0.82
CHL1O00533 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC20.16■□□□□ 0.82
CHL1O00533 AL162726.2-201ENST00000438986 1017 ntBASIC20.16■□□□□ 0.82
CHL1O00533 AC007389.4-201ENST00000454674 793 ntBASIC20.16■□□□□ 0.82
CHL1O00533 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC20.16■□□□□ 0.82
CHL1O00533 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC20.16■□□□□ 0.82
CHL1O00533 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC20.16■□□□□ 0.82
CHL1O00533 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC20.16■□□□□ 0.82
CHL1O00533 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC20.16■□□□□ 0.82
CHL1O00533 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHL1O00533 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHL1O00533 AC005252.2-201ENST00000624630 1141 ntBASIC20.16■□□□□ 0.82
CHL1O00533 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHL1O00533 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CHL1O00533 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC20.16■□□□□ 0.82
CHL1O00533 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHL1O00533 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHL1O00533 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHL1O00533 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHL1O00533 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHL1O00533 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CHL1O00533 AC090616.6-203ENST00000579186 1945 ntBASIC20.15■□□□□ 0.82
CHL1O00533 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC20.15■□□□□ 0.82
CHL1O00533 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
CHL1O00533 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHL1O00533 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CHL1O00533 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHL1O00533 AC007950.2-201ENST00000615045 2347 ntBASIC20.15■□□□□ 0.82
CHL1O00533 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHL1O00533 AC092850.2-201ENST00000623821 2697 ntBASIC20.15■□□□□ 0.82
CHL1O00533 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHL1O00533 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
CHL1O00533 AC079776.1-201ENST00000401540 1152 ntBASIC20.15■□□□□ 0.82
CHL1O00533 SOCS2P1-201ENST00000417727 557 ntBASIC20.15■□□□□ 0.82
CHL1O00533 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHL1O00533 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC20.15■□□□□ 0.82
CHL1O00533 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC20.15■□□□□ 0.82
CHL1O00533 AC093813.1-201ENST00000605066 256 ntBASIC20.15■□□□□ 0.82
CHL1O00533 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHL1O00533 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHL1O00533 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CHL1O00533 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CHL1O00533 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHL1O00533 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC20.15■□□□□ 0.82
CHL1O00533 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHL1O00533 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC20.15■□□□□ 0.82
CHL1O00533 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC20.15■□□□□ 0.82
CHL1O00533 STK33-217ENST00000534493 1895 ntTSL 2 BASIC20.15■□□□□ 0.82
CHL1O00533 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC20.15■□□□□ 0.82
CHL1O00533 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHL1O00533 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHL1O00533 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHL1O00533 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC20.15■□□□□ 0.82
CHL1O00533 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
CHL1O00533 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC20.14■□□□□ 0.82
CHL1O00533 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CHL1O00533 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CHL1O00533 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CHL1O00533 USE1-206ENST00000595101 1776 ntTSL 2 BASIC20.14■□□□□ 0.81
CHL1O00533 AMT-224ENST00000635808 1610 ntTSL 5 BASIC20.14■□□□□ 0.81
CHL1O00533 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHL1O00533 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHL1O00533 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
CHL1O00533 TTTY23B-201ENST00000442790 549 ntBASIC20.14■□□□□ 0.81
CHL1O00533 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC20.14■□□□□ 0.81
CHL1O00533 USP32P1-208ENST00000506594 1164 ntBASIC20.14■□□□□ 0.81
CHL1O00533 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
CHL1O00533 AC106886.1-201ENST00000568660 600 ntBASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms