Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.48□□□□□ -0.09
NPIPA3F8WFD2 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 HAUS4P1-201ENST00000406739 1145 ntBASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 AC114501.2-201ENST00000439631 535 ntBASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA3F8WFD2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 AC138969.3-201ENST00000546612 1459 ntBASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 AC138932.2-201ENST00000548268 1459 ntBASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 AC126755.4-201ENST00000549796 1459 ntBASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 AC093004.1-201ENST00000508850 424 ntBASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 TPRX2P-201ENST00000535362 881 ntBASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 SRD5A3P1-201ENST00000603021 949 ntBASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 AC004790.1-201ENST00000612686 536 ntBASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 CU639417.3-201ENST00000624240 1404 ntBASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 CYP4F24P-201ENST00000586049 1580 ntBASIC14.46□□□□□ -0.09
NPIPA3F8WFD2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
NPIPA3F8WFD2 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
NPIPA3F8WFD2 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.46□□□□□ -0.1
NPIPA3F8WFD2 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NPIPA3F8WFD2 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.46□□□□□ -0.1
NPIPA3F8WFD2 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms