Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 AC087499.6-201ENST00000411576 835 ntBASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 COX5BP8-201ENST00000416911 349 ntBASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 AC004461.2-201ENST00000629517 803 ntBASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 AL513477.1-201ENST00000602865 2407 ntBASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 AL136982.4-201ENST00000437689 1740 ntBASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 TNRC18P3-201ENST00000441896 2691 ntBASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 HAUS4P1-201ENST00000406739 1145 ntBASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 AC114501.2-201ENST00000439631 535 ntBASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA2E9PIF3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms