Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 HNRNPUP1-201ENST00000554987 333 ntBASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 AC015936.2-201ENST00000593177 259 ntBASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 MIR6805-201ENST00000615055 62 ntBASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 CU634019.7-201ENST00000624153 1185 ntBASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 FP236241.2-201ENST00000624906 1185 ntBASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 AC018892.3-201ENST00000623986 2499 ntBASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.76■□□□□ 0.11
TBC1D3FA6NER0 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 AL607033.1-201ENST00000623900 1599 ntBASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 AC134915.1-201ENST00000426461 574 ntBASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 AL162726.2-201ENST00000438986 1017 ntBASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 AC234783.1-201ENST00000441761 496 ntBASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 AC008735.3-201ENST00000596646 500 ntBASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 AL512343.1-201ENST00000605837 169 ntBASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.75■□□□□ 0.11
TBC1D3FA6NER0 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 MIR1909-201ENST00000411312 80 ntBASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 RPL13AP25-201ENST00000484130 612 ntBASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 AL359711.2-201ENST00000563105 872 ntBASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms