Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 AC134312.5-201ENST00000568031 1313 ntBASIC13.82□□□□□ -0.2
MBD3L3A6NE82 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
MBD3L3A6NE82 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.81□□□□□ -0.2
MBD3L3A6NE82 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L3A6NE82 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L3A6NE82 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L3A6NE82 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13.81□□□□□ -0.2
MBD3L3A6NE82 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L3A6NE82 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC13.81□□□□□ -0.2
MBD3L3A6NE82 AC112504.1-201ENST00000623415 1841 ntBASIC13.81□□□□□ -0.2
MBD3L3A6NE82 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L3A6NE82 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.81□□□□□ -0.2
MBD3L3A6NE82 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L3A6NE82 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L3A6NE82 AC092933.1-201ENST00000393644 945 ntBASIC13.81□□□□□ -0.2
MBD3L3A6NE82 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.81□□□□□ -0.2
MBD3L3A6NE82 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.81□□□□□ -0.2
MBD3L3A6NE82 HLA-V-201ENST00000429037 534 ntBASIC13.81□□□□□ -0.2
MBD3L3A6NE82 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L3A6NE82 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.81□□□□□ -0.2
MBD3L3A6NE82 CTBP2P5-201ENST00000454986 1264 ntBASIC13.81□□□□□ -0.2
MBD3L3A6NE82 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.81□□□□□ -0.2
MBD3L3A6NE82 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
MBD3L3A6NE82 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.81□□□□□ -0.2
MBD3L3A6NE82 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.81□□□□□ -0.2
MBD3L3A6NE82 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.81□□□□□ -0.2
MBD3L3A6NE82 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L3A6NE82 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L3A6NE82 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
MBD3L3A6NE82 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L3A6NE82 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L3A6NE82 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.81□□□□□ -0.2
MBD3L3A6NE82 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L3A6NE82 AC018695.7-201ENST00000624587 2492 ntBASIC13.81□□□□□ -0.2
MBD3L3A6NE82 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L3A6NE82 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 LTB4R2-202ENST00000528054 3092 ntBASIC13.8□□□□□ -0.2
MBD3L3A6NE82 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms