Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.07■□□□□ 0
AP4S1Q9Y587 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.07■□□□□ 0
AP4S1Q9Y587 AL139288.1-201ENST00000623748 933 ntBASIC15.07■□□□□ 0
AP4S1Q9Y587 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.07■□□□□ 0
AP4S1Q9Y587 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.07■□□□□ 0
AP4S1Q9Y587 AC140479.7-201ENST00000636301 2332 ntBASIC15.07■□□□□ 0
AP4S1Q9Y587 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
AP4S1Q9Y587 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.07■□□□□ 0
AP4S1Q9Y587 AC041040.2-201ENST00000622926 2899 ntBASIC15.07■□□□□ 0
AP4S1Q9Y587 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
AP4S1Q9Y587 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.07■□□□□ 0
AP4S1Q9Y587 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
AP4S1Q9Y587 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
AP4S1Q9Y587 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.07■□□□□ 0
AP4S1Q9Y587 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.07■□□□□ 0
AP4S1Q9Y587 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
AP4S1Q9Y587 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.07■□□□□ 0
AP4S1Q9Y587 AC134407.2-201ENST00000625089 1978 ntBASIC15.07■□□□□ 0
AP4S1Q9Y587 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
AP4S1Q9Y587 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
AP4S1Q9Y587 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
AP4S1Q9Y587 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.07■□□□□ 0
AP4S1Q9Y587 AC012569.1-201ENST00000591191 1524 ntBASIC15.07■□□□□ 0
AP4S1Q9Y587 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
AP4S1Q9Y587 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.07■□□□□ 0
AP4S1Q9Y587 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
AP4S1Q9Y587 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
AP4S1Q9Y587 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.06■□□□□ 0
AP4S1Q9Y587 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.06■□□□□ 0
AP4S1Q9Y587 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.06■□□□□ 0
AP4S1Q9Y587 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.06■□□□□ 0
AP4S1Q9Y587 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.06■□□□□ 0
AP4S1Q9Y587 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
AP4S1Q9Y587 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 AC023024.2-201ENST00000623561 1993 ntBASIC15.06■□□□□ 0
AP4S1Q9Y587 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
AP4S1Q9Y587 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.06■□□□□ 0
AP4S1Q9Y587 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.06■□□□□ 0
AP4S1Q9Y587 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.06■□□□□ 0
AP4S1Q9Y587 AC093724.1-201ENST00000448659 1027 ntBASIC15.06■□□□□ 0
AP4S1Q9Y587 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.06■□□□□ 0
AP4S1Q9Y587 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.06■□□□□ 0
AP4S1Q9Y587 AL591684.3-201ENST00000605187 298 ntBASIC15.06■□□□□ 0
AP4S1Q9Y587 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.06■□□□□ 0
AP4S1Q9Y587 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.06■□□□□ 0
AP4S1Q9Y587 AL805961.1-202ENST00000641562 540 ntBASIC15.06■□□□□ 0
AP4S1Q9Y587 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.06■□□□□ 0
AP4S1Q9Y587 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.06■□□□□ 0
AP4S1Q9Y587 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.06■□□□□ 0
AP4S1Q9Y587 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.06■□□□□ 0
AP4S1Q9Y587 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
AP4S1Q9Y587 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
AP4S1Q9Y587 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.06■□□□□ 0
AP4S1Q9Y587 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
AP4S1Q9Y587 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.06■□□□□ 0
AP4S1Q9Y587 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
AP4S1Q9Y587 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
AP4S1Q9Y587 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
AP4S1Q9Y587 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
AP4S1Q9Y587 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
AP4S1Q9Y587 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.05■□□□□ 0
AP4S1Q9Y587 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
AP4S1Q9Y587 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
AP4S1Q9Y587 ST20-AS1-201ENST00000560255 4223 ntBASIC15.05■□□□□ 0
AP4S1Q9Y587 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
AP4S1Q9Y587 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
AP4S1Q9Y587 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
AP4S1Q9Y587 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.05■□□□□ 0
AP4S1Q9Y587 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.05■□□□□ -0
AP4S1Q9Y587 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
AP4S1Q9Y587 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms