Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NINLQ9Y2I6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 AC022137.2-201ENST00000503482 481 ntBASIC21.49■■□□□ 1.03
NINLQ9Y2I6 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 METTL26-214ENST00000614890 801 ntTSL 3 BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 GPR39-203ENST00000622084 900 ntTSL 5 BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
NINLQ9Y2I6 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC21.48■■□□□ 1.03
NINLQ9Y2I6 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC21.48■■□□□ 1.03
NINLQ9Y2I6 TDH-203ENST00000531764 1110 ntBASIC21.48■■□□□ 1.03
NINLQ9Y2I6 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC21.48■■□□□ 1.03
NINLQ9Y2I6 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NINLQ9Y2I6 APRT-204ENST00000563655 709 ntTSL 5 BASIC21.48■■□□□ 1.03
NINLQ9Y2I6 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
NINLQ9Y2I6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NINLQ9Y2I6 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
NINLQ9Y2I6 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
NINLQ9Y2I6 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NINLQ9Y2I6 AC020907.1-201ENST00000616460 1350 ntBASIC21.48■■□□□ 1.03
NINLQ9Y2I6 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NINLQ9Y2I6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NINLQ9Y2I6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NINLQ9Y2I6 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC21.48■■□□□ 1.03
NINLQ9Y2I6 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC21.48■■□□□ 1.03
NINLQ9Y2I6 SNX29P1-201ENST00000548357 1007 ntBASIC21.48■■□□□ 1.03
NINLQ9Y2I6 ATF5-205ENST00000600336 682 ntTSL 2 BASIC21.48■■□□□ 1.03
NINLQ9Y2I6 AL022328.1-201ENST00000610050 478 ntBASIC21.48■■□□□ 1.03
NINLQ9Y2I6 MIR6869-201ENST00000619434 62 ntBASIC21.48■■□□□ 1.03
NINLQ9Y2I6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NINLQ9Y2I6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NINLQ9Y2I6 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NINLQ9Y2I6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
NINLQ9Y2I6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NINLQ9Y2I6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC21.47■■□□□ 1.03
NINLQ9Y2I6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NINLQ9Y2I6 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
NINLQ9Y2I6 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NINLQ9Y2I6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NINLQ9Y2I6 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NINLQ9Y2I6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NINLQ9Y2I6 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
NINLQ9Y2I6 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC21.47■■□□□ 1.03
NINLQ9Y2I6 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC21.47■■□□□ 1.03
NINLQ9Y2I6 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NINLQ9Y2I6 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NINLQ9Y2I6 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
NINLQ9Y2I6 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NINLQ9Y2I6 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC21.47■■□□□ 1.03
NINLQ9Y2I6 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC21.47■■□□□ 1.03
NINLQ9Y2I6 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC21.47■■□□□ 1.03
NINLQ9Y2I6 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC21.47■■□□□ 1.03
NINLQ9Y2I6 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
NINLQ9Y2I6 AP001889.1-201ENST00000525414 633 ntBASIC21.47■■□□□ 1.03
NINLQ9Y2I6 SLC25A47P1-201ENST00000531577 414 ntBASIC21.47■■□□□ 1.03
NINLQ9Y2I6 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
NINLQ9Y2I6 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC21.47■■□□□ 1.03
NINLQ9Y2I6 TBCB-211ENST00000589996 724 ntTSL 3 BASIC21.47■■□□□ 1.03
NINLQ9Y2I6 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
NINLQ9Y2I6 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC21.47■■□□□ 1.03
NINLQ9Y2I6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
NINLQ9Y2I6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
NINLQ9Y2I6 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms