Protein–RNA interactions for Protein: Q9P1Z9

CCDC180, Coiled-coil domain-containing protein 180, humanhuman

Predictions only

Length 1,646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180Q9P1Z9 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
CCDC180Q9P1Z9 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CCDC180Q9P1Z9 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CCDC180Q9P1Z9 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
CCDC180Q9P1Z9 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC31.43■■■□□ 2.62
CCDC180Q9P1Z9 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC31.43■■■□□ 2.62
CCDC180Q9P1Z9 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC31.43■■■□□ 2.62
CCDC180Q9P1Z9 AC090857.1-201ENST00000527400 390 ntBASIC31.43■■■□□ 2.62
CCDC180Q9P1Z9 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC31.43■■■□□ 2.62
CCDC180Q9P1Z9 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC31.43■■■□□ 2.62
CCDC180Q9P1Z9 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC31.43■■■□□ 2.62
CCDC180Q9P1Z9 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC31.43■■■□□ 2.62
CCDC180Q9P1Z9 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CCDC180Q9P1Z9 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CCDC180Q9P1Z9 AC084364.1-201ENST00000551967 1556 ntBASIC31.43■■■□□ 2.62
CCDC180Q9P1Z9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC31.43■■■□□ 2.62
CCDC180Q9P1Z9 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
CCDC180Q9P1Z9 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC31.43■■■□□ 2.62
CCDC180Q9P1Z9 ALOX12P2-203ENST00000570921 1945 ntBASIC31.43■■■□□ 2.62
CCDC180Q9P1Z9 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CCDC180Q9P1Z9 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC31.42■■■□□ 2.62
CCDC180Q9P1Z9 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC31.42■■■□□ 2.62
CCDC180Q9P1Z9 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CCDC180Q9P1Z9 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
CCDC180Q9P1Z9 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CCDC180Q9P1Z9 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC31.42■■■□□ 2.62
CCDC180Q9P1Z9 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC31.42■■■□□ 2.62
CCDC180Q9P1Z9 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC31.42■■■□□ 2.62
CCDC180Q9P1Z9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
CCDC180Q9P1Z9 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC31.42■■■□□ 2.62
CCDC180Q9P1Z9 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CCDC180Q9P1Z9 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CCDC180Q9P1Z9 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC31.42■■■□□ 2.62
CCDC180Q9P1Z9 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
CCDC180Q9P1Z9 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC31.42■■■□□ 2.62
CCDC180Q9P1Z9 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC180Q9P1Z9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC180Q9P1Z9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC180Q9P1Z9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC180Q9P1Z9 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC180Q9P1Z9 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC180Q9P1Z9 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC31.41■■■□□ 2.62
CCDC180Q9P1Z9 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
CCDC180Q9P1Z9 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
CCDC180Q9P1Z9 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC180Q9P1Z9 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC31.41■■■□□ 2.62
CCDC180Q9P1Z9 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC180Q9P1Z9 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC31.41■■■□□ 2.62
CCDC180Q9P1Z9 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC31.41■■■□□ 2.62
CCDC180Q9P1Z9 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC180Q9P1Z9 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC180Q9P1Z9 AC078991.1-201ENST00000437297 610 ntBASIC31.41■■■□□ 2.62
CCDC180Q9P1Z9 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC180Q9P1Z9 NDUFS6P1-201ENST00000485187 316 ntBASIC31.41■■■□□ 2.62
CCDC180Q9P1Z9 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC180Q9P1Z9 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC180Q9P1Z9 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CCDC180Q9P1Z9 SHC1P1-201ENST00000425230 1745 ntBASIC31.4■■■□□ 2.62
CCDC180Q9P1Z9 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CCDC180Q9P1Z9 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CCDC180Q9P1Z9 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC31.4■■■□□ 2.62
CCDC180Q9P1Z9 INO80C-210ENST00000590757 595 ntTSL 2 BASIC31.4■■■□□ 2.62
CCDC180Q9P1Z9 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC31.4■■■□□ 2.62
CCDC180Q9P1Z9 AC007881.3-201ENST00000608897 607 ntBASIC31.4■■■□□ 2.62
CCDC180Q9P1Z9 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC31.4■■■□□ 2.62
CCDC180Q9P1Z9 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CCDC180Q9P1Z9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CCDC180Q9P1Z9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
CCDC180Q9P1Z9 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC31.4■■■□□ 2.62
CCDC180Q9P1Z9 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC31.39■■■□□ 2.62
CCDC180Q9P1Z9 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
CCDC180Q9P1Z9 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC31.39■■■□□ 2.62
CCDC180Q9P1Z9 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC31.39■■■□□ 2.62
CCDC180Q9P1Z9 MIR3677-201ENST00000578964 60 ntBASIC31.39■■■□□ 2.62
CCDC180Q9P1Z9 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC31.39■■■□□ 2.62
CCDC180Q9P1Z9 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CCDC180Q9P1Z9 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC31.39■■■□□ 2.62
CCDC180Q9P1Z9 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CCDC180Q9P1Z9 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CCDC180Q9P1Z9 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CCDC180Q9P1Z9 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
CCDC180Q9P1Z9 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC31.39■■■□□ 2.61
CCDC180Q9P1Z9 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CCDC180Q9P1Z9 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
CCDC180Q9P1Z9 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CCDC180Q9P1Z9 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC31.38■■■□□ 2.61
CCDC180Q9P1Z9 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC31.38■■■□□ 2.61
CCDC180Q9P1Z9 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC31.38■■■□□ 2.61
CCDC180Q9P1Z9 SNORD3B-2-202ENST00000571722 791 ntBASIC31.38■■■□□ 2.61
CCDC180Q9P1Z9 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC31.38■■■□□ 2.61
CCDC180Q9P1Z9 AC242376.2-201ENST00000619355 883 ntBASIC31.38■■■□□ 2.61
CCDC180Q9P1Z9 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC31.38■■■□□ 2.61
CCDC180Q9P1Z9 AC002472.3-201ENST00000640124 621 ntBASIC31.38■■■□□ 2.61
CCDC180Q9P1Z9 Z98259.2-201ENST00000641583 609 ntBASIC31.38■■■□□ 2.61
CCDC180Q9P1Z9 MTHFR-217ENST00000641820 1569 ntBASIC31.38■■■□□ 2.61
CCDC180Q9P1Z9 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CCDC180Q9P1Z9 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC31.38■■■□□ 2.61
CCDC180Q9P1Z9 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
CCDC180Q9P1Z9 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
CCDC180Q9P1Z9 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms