Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 AL513523.2-202ENST00000427283 2040 ntBASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 SLC25A24P2-201ENST00000415059 510 ntBASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 AC134915.1-201ENST00000426461 574 ntBASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 AC016694.1-201ENST00000434179 700 ntBASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 IGHJ2P-201ENST00000454480 60 ntBASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 FAM86HP-204ENST00000513466 959 ntBASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 KRT90P-201ENST00000549264 1064 ntBASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 CLUHP6-201ENST00000580789 941 ntBASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 AC106872.11-201ENST00000605838 421 ntBASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 AL021578.1-201ENST00000613646 709 ntBASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM7Q9NR12 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
PDLIM7Q9NR12 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDLIM7Q9NR12 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.58■□□□□ 0.41
PDLIM7Q9NR12 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.58■□□□□ 0.41
PDLIM7Q9NR12 AL607033.1-201ENST00000623900 1599 ntBASIC17.58■□□□□ 0.41
PDLIM7Q9NR12 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.58■□□□□ 0.41
PDLIM7Q9NR12 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDLIM7Q9NR12 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDLIM7Q9NR12 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 BAATP1-201ENST00000412284 1225 ntBASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 AC106760.1-201ENST00000508690 800 ntBASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 RHOXF1P1-202ENST00000635473 501 ntBASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 MSTO2P-201ENST00000314835 1709 ntBASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM7Q9NR12 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.57■□□□□ 0.4
PDLIM7Q9NR12 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM7Q9NR12 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PDLIM7Q9NR12 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM7Q9NR12 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM7Q9NR12 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
PDLIM7Q9NR12 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PDLIM7Q9NR12 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.57■□□□□ 0.4
PDLIM7Q9NR12 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.57■□□□□ 0.4
PDLIM7Q9NR12 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM7Q9NR12 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.57■□□□□ 0.4
PDLIM7Q9NR12 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM7Q9NR12 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms