Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDH9Q9HC56 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDH9Q9HC56 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
PCDH9Q9HC56 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH9Q9HC56 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH9Q9HC56 AP3S2-216ENST00000617003 1561 ntBASIC16.43■□□□□ 0.22
PCDH9Q9HC56 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 AC112693.3-201ENST00000624819 1983 ntBASIC16.42■□□□□ 0.22
PCDH9Q9HC56 AC018892.3-201ENST00000623986 2499 ntBASIC16.42■□□□□ 0.22
PCDH9Q9HC56 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 RBPMS2P1-201ENST00000437762 623 ntBASIC16.42■□□□□ 0.22
PCDH9Q9HC56 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 AP001160.2-201ENST00000596071 487 ntBASIC16.42■□□□□ 0.22
PCDH9Q9HC56 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 REXO1L1P-202ENST00000608646 1974 ntBASIC16.42■□□□□ 0.22
PCDH9Q9HC56 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH9Q9HC56 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 GPS2P2-201ENST00000430745 888 ntBASIC16.41■□□□□ 0.22
PCDH9Q9HC56 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 ALG1L8P-201ENST00000533887 760 ntBASIC16.41■□□□□ 0.22
PCDH9Q9HC56 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 MIR4313-201ENST00000580760 101 ntBASIC16.41■□□□□ 0.22
PCDH9Q9HC56 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 GPALPP1-207ENST00000611650 899 ntBASIC16.41■□□□□ 0.22
PCDH9Q9HC56 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 AC099063.4-201ENST00000641099 1602 ntBASIC16.41■□□□□ 0.22
PCDH9Q9HC56 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH9Q9HC56 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDH9Q9HC56 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH9Q9HC56 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH9Q9HC56 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDH9Q9HC56 AC009090.5-201ENST00000624886 2285 ntBASIC16.4■□□□□ 0.22
PCDH9Q9HC56 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH9Q9HC56 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH9Q9HC56 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
PCDH9Q9HC56 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH9Q9HC56 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH9Q9HC56 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH9Q9HC56 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDH9Q9HC56 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH9Q9HC56 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms