Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 HNRNPDP1-201ENST00000439535 754 ntBASIC14.09□□□□□ -0.15
COMMD4Q9H0A8 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.09□□□□□ -0.15
COMMD4Q9H0A8 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
COMMD4Q9H0A8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.09□□□□□ -0.15
COMMD4Q9H0A8 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
COMMD4Q9H0A8 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.09□□□□□ -0.15
COMMD4Q9H0A8 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.09□□□□□ -0.15
COMMD4Q9H0A8 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.09□□□□□ -0.15
COMMD4Q9H0A8 AC002347.1-201ENST00000569543 541 ntBASIC14.09□□□□□ -0.15
COMMD4Q9H0A8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
COMMD4Q9H0A8 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COMMD4Q9H0A8 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COMMD4Q9H0A8 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
COMMD4Q9H0A8 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
COMMD4Q9H0A8 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COMMD4Q9H0A8 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.09□□□□□ -0.15
COMMD4Q9H0A8 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
COMMD4Q9H0A8 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COMMD4Q9H0A8 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COMMD4Q9H0A8 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.09□□□□□ -0.15
COMMD4Q9H0A8 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.09□□□□□ -0.15
COMMD4Q9H0A8 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.09□□□□□ -0.15
COMMD4Q9H0A8 AC092127.1-201ENST00000567093 3455 ntBASIC14.09□□□□□ -0.15
COMMD4Q9H0A8 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
COMMD4Q9H0A8 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
COMMD4Q9H0A8 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
COMMD4Q9H0A8 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
COMMD4Q9H0A8 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
COMMD4Q9H0A8 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
COMMD4Q9H0A8 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.08□□□□□ -0.15
COMMD4Q9H0A8 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 AC092910.1-201ENST00000482027 1129 ntBASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 AC007064.4-201ENST00000637740 555 ntBASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
COMMD4Q9H0A8 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 WASH6P-202ENST00000359512 1437 ntBASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 AC004870.1-201ENST00000315132 882 ntBASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 VN2R19P-201ENST00000442399 1052 ntBASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 FAAHP1-202ENST00000446499 1238 ntBASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COMMD4Q9H0A8 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms