Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
VRK1Q99986 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VRK1Q99986 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VRK1Q99986 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
VRK1Q99986 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VRK1Q99986 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VRK1Q99986 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.12□□□□□ -0.15
VRK1Q99986 AC093214.1-201ENST00000511688 1107 ntBASIC14.12□□□□□ -0.15
VRK1Q99986 AC069262.1-201ENST00000539058 672 ntBASIC14.12□□□□□ -0.15
VRK1Q99986 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.12□□□□□ -0.15
VRK1Q99986 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.12□□□□□ -0.15
VRK1Q99986 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.12□□□□□ -0.15
VRK1Q99986 DUX4L27-201ENST00000554796 1261 ntBASIC14.12□□□□□ -0.15
VRK1Q99986 AC026150.2-201ENST00000564693 1156 ntBASIC14.12□□□□□ -0.15
VRK1Q99986 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
VRK1Q99986 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VRK1Q99986 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.12□□□□□ -0.15
VRK1Q99986 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.12□□□□□ -0.15
VRK1Q99986 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VRK1Q99986 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
VRK1Q99986 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VRK1Q99986 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VRK1Q99986 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
VRK1Q99986 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VRK1Q99986 AC022532.1-201ENST00000624563 1728 ntBASIC14.12□□□□□ -0.15
VRK1Q99986 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
VRK1Q99986 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VRK1Q99986 OR2I1P-209ENST00000641730 5365 ntBASIC14.12□□□□□ -0.15
VRK1Q99986 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VRK1Q99986 AL671710.1-201ENST00000610245 2349 ntBASIC14.12□□□□□ -0.15
VRK1Q99986 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.12□□□□□ -0.15
VRK1Q99986 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VRK1Q99986 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VRK1Q99986 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VRK1Q99986 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
VRK1Q99986 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
VRK1Q99986 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VRK1Q99986 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.11□□□□□ -0.15
VRK1Q99986 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.11□□□□□ -0.15
VRK1Q99986 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VRK1Q99986 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
VRK1Q99986 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
VRK1Q99986 ME2P1-201ENST00000426028 1970 ntBASIC14.11□□□□□ -0.15
VRK1Q99986 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.11□□□□□ -0.15
VRK1Q99986 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.11□□□□□ -0.15
VRK1Q99986 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VRK1Q99986 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
VRK1Q99986 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VRK1Q99986 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VRK1Q99986 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.11□□□□□ -0.15
VRK1Q99986 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.11□□□□□ -0.15
VRK1Q99986 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
VRK1Q99986 AC125807.1-201ENST00000483097 614 ntBASIC14.11□□□□□ -0.15
VRK1Q99986 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.11□□□□□ -0.15
VRK1Q99986 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.11□□□□□ -0.15
VRK1Q99986 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.11□□□□□ -0.15
VRK1Q99986 ALG1L8P-201ENST00000533887 760 ntBASIC14.11□□□□□ -0.15
VRK1Q99986 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
VRK1Q99986 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.11□□□□□ -0.15
VRK1Q99986 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.11□□□□□ -0.15
VRK1Q99986 AL138918.1-201ENST00000568306 659 ntBASIC14.11□□□□□ -0.15
VRK1Q99986 AP000842.3-202ENST00000569238 1080 ntBASIC14.11□□□□□ -0.15
VRK1Q99986 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VRK1Q99986 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VRK1Q99986 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.11□□□□□ -0.15
VRK1Q99986 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VRK1Q99986 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.11□□□□□ -0.15
VRK1Q99986 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VRK1Q99986 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VRK1Q99986 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VRK1Q99986 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VRK1Q99986 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
VRK1Q99986 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VRK1Q99986 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
VRK1Q99986 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.11□□□□□ -0.15
VRK1Q99986 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VRK1Q99986 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VRK1Q99986 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.11□□□□□ -0.15
VRK1Q99986 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VRK1Q99986 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VRK1Q99986 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VRK1Q99986 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.11□□□□□ -0.15
VRK1Q99986 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VRK1Q99986 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
VRK1Q99986 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VRK1Q99986 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
VRK1Q99986 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
VRK1Q99986 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VRK1Q99986 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VRK1Q99986 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VRK1Q99986 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VRK1Q99986 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VRK1Q99986 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VRK1Q99986 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
VRK1Q99986 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VRK1Q99986 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.1□□□□□ -0.15
VRK1Q99986 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VRK1Q99986 AL009178.2-201ENST00000597278 2719 ntBASIC14.1□□□□□ -0.15
VRK1Q99986 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VRK1Q99986 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms