Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNX18Q96RF0 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.55□□□□□ -0.08
SNX18Q96RF0 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SNX18Q96RF0 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.55□□□□□ -0.08
SNX18Q96RF0 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SNX18Q96RF0 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNX18Q96RF0 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNX18Q96RF0 AC015656.1-201ENST00000624209 3578 ntBASIC14.55□□□□□ -0.08
SNX18Q96RF0 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNX18Q96RF0 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNX18Q96RF0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNX18Q96RF0 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNX18Q96RF0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SNX18Q96RF0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
SNX18Q96RF0 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNX18Q96RF0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SNX18Q96RF0 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.55□□□□□ -0.08
SNX18Q96RF0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNX18Q96RF0 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNX18Q96RF0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.55□□□□□ -0.08
SNX18Q96RF0 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.55□□□□□ -0.08
SNX18Q96RF0 HAUS4P1-201ENST00000406739 1145 ntBASIC14.55□□□□□ -0.08
SNX18Q96RF0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.55□□□□□ -0.08
SNX18Q96RF0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.55□□□□□ -0.08
SNX18Q96RF0 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.55□□□□□ -0.08
SNX18Q96RF0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.55□□□□□ -0.08
SNX18Q96RF0 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.55□□□□□ -0.08
SNX18Q96RF0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.55□□□□□ -0.08
SNX18Q96RF0 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNX18Q96RF0 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.55□□□□□ -0.08
SNX18Q96RF0 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.55□□□□□ -0.08
SNX18Q96RF0 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.55□□□□□ -0.08
SNX18Q96RF0 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNX18Q96RF0 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SNX18Q96RF0 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
SNX18Q96RF0 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNX18Q96RF0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.55□□□□□ -0.08
SNX18Q96RF0 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SNX18Q96RF0 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNX18Q96RF0 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.55□□□□□ -0.08
SNX18Q96RF0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.55□□□□□ -0.08
SNX18Q96RF0 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SNX18Q96RF0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.55□□□□□ -0.08
SNX18Q96RF0 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.55□□□□□ -0.08
SNX18Q96RF0 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.55□□□□□ -0.08
SNX18Q96RF0 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNX18Q96RF0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.55□□□□□ -0.08
SNX18Q96RF0 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNX18Q96RF0 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
SNX18Q96RF0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.55□□□□□ -0.08
SNX18Q96RF0 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
SNX18Q96RF0 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNX18Q96RF0 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SNX18Q96RF0 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.54□□□□□ -0.08
SNX18Q96RF0 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNX18Q96RF0 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.54□□□□□ -0.08
SNX18Q96RF0 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SNX18Q96RF0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNX18Q96RF0 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.54□□□□□ -0.08
SNX18Q96RF0 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNX18Q96RF0 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNX18Q96RF0 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNX18Q96RF0 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SNX18Q96RF0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SNX18Q96RF0 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNX18Q96RF0 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SNX18Q96RF0 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SNX18Q96RF0 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNX18Q96RF0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNX18Q96RF0 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNX18Q96RF0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SNX18Q96RF0 AC004832.2-201ENST00000426397 482 ntBASIC14.54□□□□□ -0.08
SNX18Q96RF0 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.54□□□□□ -0.08
SNX18Q96RF0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.54□□□□□ -0.08
SNX18Q96RF0 AC112482.1-201ENST00000492080 688 ntBASIC14.54□□□□□ -0.08
SNX18Q96RF0 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.54□□□□□ -0.08
SNX18Q96RF0 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SNX18Q96RF0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.54□□□□□ -0.08
SNX18Q96RF0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.54□□□□□ -0.08
SNX18Q96RF0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.54□□□□□ -0.08
SNX18Q96RF0 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.54□□□□□ -0.08
SNX18Q96RF0 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.54□□□□□ -0.08
SNX18Q96RF0 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.54□□□□□ -0.08
SNX18Q96RF0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.54□□□□□ -0.08
SNX18Q96RF0 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.54□□□□□ -0.08
SNX18Q96RF0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.54□□□□□ -0.08
SNX18Q96RF0 AL161645.1-201ENST00000622716 1255 ntBASIC14.54□□□□□ -0.08
SNX18Q96RF0 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SNX18Q96RF0 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SNX18Q96RF0 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SNX18Q96RF0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.54□□□□□ -0.08
SNX18Q96RF0 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.54□□□□□ -0.08
SNX18Q96RF0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNX18Q96RF0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.54□□□□□ -0.08
SNX18Q96RF0 LINC01101-201ENST00000622953 1884 ntBASIC14.54□□□□□ -0.08
SNX18Q96RF0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNX18Q96RF0 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNX18Q96RF0 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SNX18Q96RF0 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNX18Q96RF0 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms