Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC12.94□□□□□ -0.34
ZNF48Q96MX3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF48Q96MX3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF48Q96MX3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF48Q96MX3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
ZNF48Q96MX3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
ZNF48Q96MX3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC12.94□□□□□ -0.34
ZNF48Q96MX3 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.94□□□□□ -0.34
ZNF48Q96MX3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF48Q96MX3 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF48Q96MX3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF48Q96MX3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF48Q96MX3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF48Q96MX3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 AC112492.5-201ENST00000421897 457 ntBASIC12.93□□□□□ -0.34
ZNF48Q96MX3 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 AL162274.1-201ENST00000617191 1098 ntBASIC12.93□□□□□ -0.34
ZNF48Q96MX3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 AC006449.6-201ENST00000612330 2296 ntBASIC12.93□□□□□ -0.34
ZNF48Q96MX3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.93□□□□□ -0.34
ZNF48Q96MX3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 ACA64.2-201ENST00000459014 129 ntBASIC12.92□□□□□ -0.34
ZNF48Q96MX3 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms