Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 CEND1P1-201ENST00000451006 455 ntBASIC16.41■□□□□ 0.22
C9orf72Q96LT7 AC245100.5-201ENST00000452108 331 ntBASIC16.41■□□□□ 0.22
C9orf72Q96LT7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 SNHG9-202ENST00000564014 471 ntBASIC16.41■□□□□ 0.22
C9orf72Q96LT7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 AL365330.1-201ENST00000607459 531 ntBASIC16.41■□□□□ 0.22
C9orf72Q96LT7 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
C9orf72Q96LT7 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 AC106881.1-201ENST00000605849 3329 ntBASIC16.4■□□□□ 0.22
C9orf72Q96LT7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 AC254562.1-201ENST00000417586 456 ntBASIC16.4■□□□□ 0.22
C9orf72Q96LT7 FAM58CP-201ENST00000435741 640 ntBASIC16.4■□□□□ 0.22
C9orf72Q96LT7 KRT18P34-201ENST00000488218 1270 ntBASIC16.4■□□□□ 0.22
C9orf72Q96LT7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 TCAF2P1-201ENST00000291129 2421 ntBASIC16.4■□□□□ 0.22
C9orf72Q96LT7 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
C9orf72Q96LT7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.39■□□□□ 0.22
C9orf72Q96LT7 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
C9orf72Q96LT7 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
C9orf72Q96LT7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C9orf72Q96LT7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.39■□□□□ 0.21
C9orf72Q96LT7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C9orf72Q96LT7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
C9orf72Q96LT7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.39■□□□□ 0.21
C9orf72Q96LT7 AC068587.6-202ENST00000641839 5619 ntBASIC16.39■□□□□ 0.21
C9orf72Q96LT7 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C9orf72Q96LT7 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
C9orf72Q96LT7 AC073439.1-201ENST00000624121 1774 ntBASIC16.39■□□□□ 0.21
C9orf72Q96LT7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
C9orf72Q96LT7 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
C9orf72Q96LT7 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
C9orf72Q96LT7 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms