Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ALPK3Q96L96 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ALPK3Q96L96 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ALPK3Q96L96 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ALPK3Q96L96 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ALPK3Q96L96 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC16.87■□□□□ 0.29
ALPK3Q96L96 ISCA2P1-201ENST00000425548 448 ntBASIC16.87■□□□□ 0.29
ALPK3Q96L96 RN7SL67P-201ENST00000492147 296 ntBASIC16.87■□□□□ 0.29
ALPK3Q96L96 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.87■□□□□ 0.29
ALPK3Q96L96 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.87■□□□□ 0.29
ALPK3Q96L96 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.87■□□□□ 0.29
ALPK3Q96L96 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ALPK3Q96L96 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ALPK3Q96L96 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ALPK3Q96L96 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ALPK3Q96L96 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.87■□□□□ 0.29
ALPK3Q96L96 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ALPK3Q96L96 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.87■□□□□ 0.29
ALPK3Q96L96 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ALPK3Q96L96 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ALPK3Q96L96 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ALPK3Q96L96 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.87■□□□□ 0.29
ALPK3Q96L96 TBC1D3J-201ENST00000620719 1426 ntBASIC16.87■□□□□ 0.29
ALPK3Q96L96 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ALPK3Q96L96 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ALPK3Q96L96 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ALPK3Q96L96 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.86■□□□□ 0.29
ALPK3Q96L96 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ALPK3Q96L96 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.86■□□□□ 0.29
ALPK3Q96L96 RN7SKP214-201ENST00000364208 315 ntBASIC16.86■□□□□ 0.29
ALPK3Q96L96 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.86■□□□□ 0.29
ALPK3Q96L96 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC16.86■□□□□ 0.29
ALPK3Q96L96 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALPK3Q96L96 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
ALPK3Q96L96 AC242376.1-201ENST00000559033 726 ntBASIC16.86■□□□□ 0.29
ALPK3Q96L96 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC16.86■□□□□ 0.29
ALPK3Q96L96 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.86■□□□□ 0.29
ALPK3Q96L96 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.86■□□□□ 0.29
ALPK3Q96L96 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.86■□□□□ 0.29
ALPK3Q96L96 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ALPK3Q96L96 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.86■□□□□ 0.29
ALPK3Q96L96 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.86■□□□□ 0.29
ALPK3Q96L96 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.86■□□□□ 0.29
ALPK3Q96L96 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
ALPK3Q96L96 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.86■□□□□ 0.29
ALPK3Q96L96 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.86■□□□□ 0.29
ALPK3Q96L96 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ALPK3Q96L96 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALPK3Q96L96 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.86■□□□□ 0.29
ALPK3Q96L96 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ALPK3Q96L96 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
ALPK3Q96L96 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALPK3Q96L96 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALPK3Q96L96 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.86■□□□□ 0.29
ALPK3Q96L96 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALPK3Q96L96 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALPK3Q96L96 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ALPK3Q96L96 AC006335.1-201ENST00000445200 547 ntBASIC16.86■□□□□ 0.29
ALPK3Q96L96 HLA-J-204ENST00000495278 958 ntBASIC16.86■□□□□ 0.29
ALPK3Q96L96 AC026410.1-201ENST00000507366 1101 ntBASIC16.86■□□□□ 0.29
ALPK3Q96L96 AC009779.1-201ENST00000551138 283 ntBASIC16.86■□□□□ 0.29
ALPK3Q96L96 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC16.86■□□□□ 0.29
ALPK3Q96L96 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC16.86■□□□□ 0.29
ALPK3Q96L96 AC103691.2-201ENST00000618824 433 ntBASIC16.86■□□□□ 0.29
ALPK3Q96L96 AC007718.1-201ENST00000621078 280 ntBASIC16.86■□□□□ 0.29
ALPK3Q96L96 AC127024.7-201ENST00000625101 200 ntBASIC16.86■□□□□ 0.29
ALPK3Q96L96 AC005915.1-201ENST00000624912 2018 ntBASIC16.86■□□□□ 0.29
ALPK3Q96L96 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALPK3Q96L96 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
ALPK3Q96L96 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.86■□□□□ 0.29
ALPK3Q96L96 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
ALPK3Q96L96 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
ALPK3Q96L96 PRORSD1P-202ENST00000563365 2154 ntBASIC16.85■□□□□ 0.29
ALPK3Q96L96 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
ALPK3Q96L96 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
ALPK3Q96L96 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
ALPK3Q96L96 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALPK3Q96L96 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ALPK3Q96L96 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALPK3Q96L96 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALPK3Q96L96 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC16.85■□□□□ 0.29
ALPK3Q96L96 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
ALPK3Q96L96 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALPK3Q96L96 RPS9P1-201ENST00000419943 583 ntBASIC16.85■□□□□ 0.29
ALPK3Q96L96 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.85■□□□□ 0.29
ALPK3Q96L96 RCC2P8-201ENST00000502779 1035 ntBASIC16.85■□□□□ 0.29
ALPK3Q96L96 TMCO5B-205ENST00000530020 894 ntBASIC16.85■□□□□ 0.29
ALPK3Q96L96 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALPK3Q96L96 AL022344.2-201ENST00000568976 968 ntBASIC16.85■□□□□ 0.29
ALPK3Q96L96 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.85■□□□□ 0.29
ALPK3Q96L96 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALPK3Q96L96 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
ALPK3Q96L96 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
ALPK3Q96L96 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.85■□□□□ 0.29
ALPK3Q96L96 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALPK3Q96L96 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
ALPK3Q96L96 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ALPK3Q96L96 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
ALPK3Q96L96 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
ALPK3Q96L96 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms