Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
SIPA1Q96FS4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIPA1Q96FS4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SIPA1Q96FS4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SIPA1Q96FS4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 AC018665.1-201ENST00000622927 1362 ntBASIC15.89■□□□□ 0.13
SIPA1Q96FS4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 ACTG1P3-201ENST00000431775 1114 ntBASIC15.89■□□□□ 0.13
SIPA1Q96FS4 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 AC104989.1-201ENST00000519711 778 ntBASIC15.89■□□□□ 0.13
SIPA1Q96FS4 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 TDH-203ENST00000531764 1110 ntBASIC15.89■□□□□ 0.13
SIPA1Q96FS4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 AL596257.1-201ENST00000641463 2694 ntBASIC15.89■□□□□ 0.13
SIPA1Q96FS4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SIPA1Q96FS4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.88■□□□□ 0.13
SIPA1Q96FS4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 AC136604.1-201ENST00000418535 575 ntBASIC15.88■□□□□ 0.13
SIPA1Q96FS4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 ENPP7P5-201ENST00000541031 1031 ntBASIC15.88■□□□□ 0.13
SIPA1Q96FS4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.88■□□□□ 0.13
SIPA1Q96FS4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms