Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
DDX11Q96FC9 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX11Q96FC9 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX11Q96FC9 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX11Q96FC9 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.9■□□□□ 0.62
DDX11Q96FC9 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.89■□□□□ 0.62
DDX11Q96FC9 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.89■□□□□ 0.62
DDX11Q96FC9 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
DDX11Q96FC9 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
DDX11Q96FC9 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.89■□□□□ 0.61
DDX11Q96FC9 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
DDX11Q96FC9 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX11Q96FC9 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DDX11Q96FC9 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.89■□□□□ 0.61
DDX11Q96FC9 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX11Q96FC9 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX11Q96FC9 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.89■□□□□ 0.61
DDX11Q96FC9 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.89■□□□□ 0.61
DDX11Q96FC9 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.89■□□□□ 0.61
DDX11Q96FC9 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.89■□□□□ 0.61
DDX11Q96FC9 SERBP1P5-201ENST00000510079 1181 ntBASIC18.89■□□□□ 0.61
DDX11Q96FC9 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.89■□□□□ 0.61
DDX11Q96FC9 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.89■□□□□ 0.61
DDX11Q96FC9 AC005225.4-201ENST00000557330 545 ntBASIC18.89■□□□□ 0.61
DDX11Q96FC9 AC012645.4-201ENST00000610691 1061 ntBASIC18.89■□□□□ 0.61
DDX11Q96FC9 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX11Q96FC9 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX11Q96FC9 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
DDX11Q96FC9 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
DDX11Q96FC9 AC144831.1-201ENST00000573312 2656 ntBASIC18.89■□□□□ 0.61
DDX11Q96FC9 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX11Q96FC9 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.89■□□□□ 0.61
DDX11Q96FC9 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX11Q96FC9 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX11Q96FC9 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX11Q96FC9 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX11Q96FC9 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DDX11Q96FC9 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX11Q96FC9 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.88■□□□□ 0.61
DDX11Q96FC9 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
DDX11Q96FC9 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDX11Q96FC9 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX11Q96FC9 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.88■□□□□ 0.61
DDX11Q96FC9 DBET-201ENST00000630918 3363 ntBASIC18.88■□□□□ 0.61
DDX11Q96FC9 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
DDX11Q96FC9 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX11Q96FC9 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX11Q96FC9 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX11Q96FC9 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX11Q96FC9 MRPS18AP1-201ENST00000414458 589 ntBASIC18.88■□□□□ 0.61
DDX11Q96FC9 TSSK5P-201ENST00000423978 907 ntBASIC18.88■□□□□ 0.61
DDX11Q96FC9 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.88■□□□□ 0.61
DDX11Q96FC9 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.88■□□□□ 0.61
DDX11Q96FC9 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.88■□□□□ 0.61
DDX11Q96FC9 AC009118.2-201ENST00000613275 655 ntBASIC18.88■□□□□ 0.61
DDX11Q96FC9 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.88■□□□□ 0.61
DDX11Q96FC9 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDX11Q96FC9 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX11Q96FC9 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
DDX11Q96FC9 AL035456.1-201ENST00000456064 1369 ntBASIC18.88■□□□□ 0.61
DDX11Q96FC9 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.88■□□□□ 0.61
DDX11Q96FC9 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.88■□□□□ 0.61
DDX11Q96FC9 AC022144.1-201ENST00000602255 1580 ntBASIC18.88■□□□□ 0.61
DDX11Q96FC9 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX11Q96FC9 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
DDX11Q96FC9 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.88■□□□□ 0.61
DDX11Q96FC9 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX11Q96FC9 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.88■□□□□ 0.61
DDX11Q96FC9 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX11Q96FC9 AL513477.1-201ENST00000602865 2407 ntBASIC18.88■□□□□ 0.61
DDX11Q96FC9 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDX11Q96FC9 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX11Q96FC9 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX11Q96FC9 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX11Q96FC9 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX11Q96FC9 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX11Q96FC9 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DDX11Q96FC9 FAM220BP-201ENST00000377689 816 ntBASIC18.87■□□□□ 0.61
DDX11Q96FC9 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DDX11Q96FC9 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DDX11Q96FC9 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.87■□□□□ 0.61
DDX11Q96FC9 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.87■□□□□ 0.61
DDX11Q96FC9 MTND6P24-201ENST00000440466 518 ntBASIC18.87■□□□□ 0.61
DDX11Q96FC9 MST1L-201ENST00000442552 2185 ntBASIC18.87■□□□□ 0.61
DDX11Q96FC9 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.87■□□□□ 0.61
DDX11Q96FC9 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.87■□□□□ 0.61
DDX11Q96FC9 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.87■□□□□ 0.61
DDX11Q96FC9 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
DDX11Q96FC9 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
DDX11Q96FC9 HLA-V-204ENST00000476601 1289 ntBASIC18.87■□□□□ 0.61
DDX11Q96FC9 AC098859.1-201ENST00000502915 1238 ntBASIC18.87■□□□□ 0.61
DDX11Q96FC9 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.87■□□□□ 0.61
DDX11Q96FC9 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.87■□□□□ 0.61
DDX11Q96FC9 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.87■□□□□ 0.61
DDX11Q96FC9 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX11Q96FC9 MIR4321-201ENST00000592276 80 ntBASIC18.87■□□□□ 0.61
DDX11Q96FC9 AC027307.3-201ENST00000594262 1100 ntBASIC18.87■□□□□ 0.61
DDX11Q96FC9 AL365330.1-201ENST00000607459 531 ntBASIC18.87■□□□□ 0.61
DDX11Q96FC9 NID2-208ENST00000617139 3827 ntTSL 5 BASIC18.87■□□□□ 0.61
DDX11Q96FC9 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms