Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.95□□□□□ -0.18
SPTSSAQ969W0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.95□□□□□ -0.18
SPTSSAQ969W0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.95□□□□□ -0.18
SPTSSAQ969W0 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SPTSSAQ969W0 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPTSSAQ969W0 AC004835.2-201ENST00000603762 682 ntBASIC13.95□□□□□ -0.18
SPTSSAQ969W0 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SPTSSAQ969W0 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.95□□□□□ -0.18
SPTSSAQ969W0 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SPTSSAQ969W0 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPTSSAQ969W0 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPTSSAQ969W0 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.95□□□□□ -0.18
SPTSSAQ969W0 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SPTSSAQ969W0 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPTSSAQ969W0 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
SPTSSAQ969W0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.95□□□□□ -0.18
SPTSSAQ969W0 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 AL136982.4-201ENST00000437689 1740 ntBASIC13.94□□□□□ -0.18
SPTSSAQ969W0 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 KRT8P37-201ENST00000451609 1420 ntBASIC13.94□□□□□ -0.18
SPTSSAQ969W0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 AP000344.2-201ENST00000512987 629 ntBASIC13.94□□□□□ -0.18
SPTSSAQ969W0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 ALG1L8P-201ENST00000533887 760 ntBASIC13.94□□□□□ -0.18
SPTSSAQ969W0 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 CYP4F24P-201ENST00000586049 1580 ntBASIC13.94□□□□□ -0.18
SPTSSAQ969W0 AL450472.2-201ENST00000603663 1156 ntBASIC13.94□□□□□ -0.18
SPTSSAQ969W0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SPTSSAQ969W0 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 AC020658.6-201ENST00000623564 1870 ntBASIC13.93□□□□□ -0.18
SPTSSAQ969W0 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 CICP13-201ENST00000422015 2789 ntBASIC13.93□□□□□ -0.18
SPTSSAQ969W0 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 AC010327.4-202ENST00000591484 748 ntBASIC13.93□□□□□ -0.18
SPTSSAQ969W0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms