Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TM9SF4Q92544 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TM9SF4Q92544 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.05■□□□□ -0
TM9SF4Q92544 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.05■□□□□ -0
TM9SF4Q92544 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.05■□□□□ -0
TM9SF4Q92544 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TM9SF4Q92544 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TM9SF4Q92544 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TM9SF4Q92544 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TM9SF4Q92544 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.05■□□□□ -0
TM9SF4Q92544 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TM9SF4Q92544 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TM9SF4Q92544 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.04■□□□□ -0
TM9SF4Q92544 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
TM9SF4Q92544 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TM9SF4Q92544 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.04■□□□□ -0
TM9SF4Q92544 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.04■□□□□ -0
TM9SF4Q92544 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.04■□□□□ -0
TM9SF4Q92544 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.04■□□□□ -0
TM9SF4Q92544 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TM9SF4Q92544 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.04■□□□□ -0
TM9SF4Q92544 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TM9SF4Q92544 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TM9SF4Q92544 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TM9SF4Q92544 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.04■□□□□ -0
TM9SF4Q92544 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TM9SF4Q92544 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TM9SF4Q92544 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.04■□□□□ -0
TM9SF4Q92544 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TM9SF4Q92544 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TM9SF4Q92544 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.04■□□□□ -0
TM9SF4Q92544 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.04■□□□□ -0
TM9SF4Q92544 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.04■□□□□ -0
TM9SF4Q92544 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.04■□□□□ -0
TM9SF4Q92544 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.04■□□□□ -0
TM9SF4Q92544 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TM9SF4Q92544 ZNF890P-202ENST00000530367 1156 ntBASIC15.04■□□□□ -0
TM9SF4Q92544 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.04■□□□□ -0
TM9SF4Q92544 TP53TG3HP-202ENST00000569755 579 ntBASIC15.04■□□□□ -0
TM9SF4Q92544 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.04■□□□□ -0
TM9SF4Q92544 AL132655.2-201ENST00000596276 594 ntBASIC15.04■□□□□ -0
TM9SF4Q92544 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.04■□□□□ -0
TM9SF4Q92544 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.04■□□□□ -0
TM9SF4Q92544 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.04■□□□□ -0
TM9SF4Q92544 AL139011.1-202ENST00000642063 584 ntBASIC15.04■□□□□ -0
TM9SF4Q92544 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TM9SF4Q92544 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TM9SF4Q92544 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TM9SF4Q92544 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TM9SF4Q92544 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TM9SF4Q92544 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.04■□□□□ -0
TM9SF4Q92544 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
TM9SF4Q92544 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TM9SF4Q92544 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TM9SF4Q92544 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.04■□□□□ -0
TM9SF4Q92544 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.03■□□□□ -0
TM9SF4Q92544 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.03■□□□□ -0
TM9SF4Q92544 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF4Q92544 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.03■□□□□ -0
TM9SF4Q92544 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TM9SF4Q92544 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.03■□□□□ -0
TM9SF4Q92544 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF4Q92544 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TM9SF4Q92544 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF4Q92544 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.03■□□□□ -0
TM9SF4Q92544 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF4Q92544 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.03■□□□□ -0
TM9SF4Q92544 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF4Q92544 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF4Q92544 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.03■□□□□ -0
TM9SF4Q92544 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.03■□□□□ -0
TM9SF4Q92544 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF4Q92544 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF4Q92544 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.03■□□□□ -0
TM9SF4Q92544 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.03■□□□□ -0
TM9SF4Q92544 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
TM9SF4Q92544 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.03■□□□□ -0
TM9SF4Q92544 DFFBP1-201ENST00000433250 979 ntBASIC15.03■□□□□ -0
TM9SF4Q92544 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.03■□□□□ -0
TM9SF4Q92544 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.03■□□□□ -0
TM9SF4Q92544 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.03■□□□□ -0
TM9SF4Q92544 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.03■□□□□ -0
TM9SF4Q92544 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.03■□□□□ -0
TM9SF4Q92544 AC135586.1-201ENST00000539323 574 ntBASIC15.03■□□□□ -0
TM9SF4Q92544 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.03■□□□□ -0
TM9SF4Q92544 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.03■□□□□ -0
TM9SF4Q92544 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.03■□□□□ -0
TM9SF4Q92544 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.03■□□□□ -0
TM9SF4Q92544 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.03■□□□□ -0
TM9SF4Q92544 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.03■□□□□ -0
TM9SF4Q92544 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.03■□□□□ -0
TM9SF4Q92544 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.03■□□□□ -0
TM9SF4Q92544 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.03■□□□□ -0
TM9SF4Q92544 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.03■□□□□ -0
TM9SF4Q92544 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF4Q92544 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF4Q92544 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TM9SF4Q92544 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.03■□□□□ -0
TM9SF4Q92544 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TM9SF4Q92544 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms