Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 HAUS4P1-201ENST00000406739 1145 ntBASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 AC097376.2-205ENST00000610159 5334 ntBASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 AC011477.6-201ENST00000604980 1927 ntBASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40AQ8WXH6 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RAB40AQ8WXH6 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB40AQ8WXH6 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB40AQ8WXH6 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB40AQ8WXH6 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB40AQ8WXH6 CICP13-201ENST00000422015 2789 ntBASIC14.02□□□□□ -0.16
RAB40AQ8WXH6 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.16
RAB40AQ8WXH6 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB40AQ8WXH6 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.02□□□□□ -0.16
RAB40AQ8WXH6 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.02□□□□□ -0.16
RAB40AQ8WXH6 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB40AQ8WXH6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RAB40AQ8WXH6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.02□□□□□ -0.16
RAB40AQ8WXH6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.02□□□□□ -0.16
RAB40AQ8WXH6 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB40AQ8WXH6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.02□□□□□ -0.16
RAB40AQ8WXH6 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB40AQ8WXH6 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 MKNK2P1-201ENST00000437526 628 ntBASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 ACTL9-202ENST00000612068 1252 ntBASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40AQ8WXH6 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms