Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 MIR648-201ENST00000385046 94 ntBASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 AP002803.1-201ENST00000528836 498 ntBASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 TMCO5B-205ENST00000530020 894 ntBASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 AC127024.7-201ENST00000625101 200 ntBASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL22A1Q8NFW1 RPS9P1-201ENST00000419943 583 ntBASIC20.56■□□□□ 0.88
COL22A1Q8NFW1 NAGK-204ENST00000443872 878 ntTSL 3 BASIC20.56■□□□□ 0.88
COL22A1Q8NFW1 FOS-204ENST00000554617 796 ntTSL 2 BASIC20.56■□□□□ 0.88
COL22A1Q8NFW1 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC20.56■□□□□ 0.88
COL22A1Q8NFW1 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC20.56■□□□□ 0.88
COL22A1Q8NFW1 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
COL22A1Q8NFW1 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC20.56■□□□□ 0.88
COL22A1Q8NFW1 AC011477.6-201ENST00000604980 1927 ntBASIC20.56■□□□□ 0.88
COL22A1Q8NFW1 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL22A1Q8NFW1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL22A1Q8NFW1 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL22A1Q8NFW1 AC055811.4-201ENST00000624039 1754 ntBASIC20.56■□□□□ 0.88
COL22A1Q8NFW1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL22A1Q8NFW1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL22A1Q8NFW1 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC20.56■□□□□ 0.88
COL22A1Q8NFW1 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL22A1Q8NFW1 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
COL22A1Q8NFW1 OR2K2-202ENST00000374428 1038 ntBASIC20.56■□□□□ 0.88
COL22A1Q8NFW1 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
COL22A1Q8NFW1 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC20.56■□□□□ 0.88
COL22A1Q8NFW1 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL22A1Q8NFW1 AC010234.1-201ENST00000494599 870 ntBASIC20.56■□□□□ 0.88
COL22A1Q8NFW1 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC20.56■□□□□ 0.88
COL22A1Q8NFW1 RNF216P1-203ENST00000404404 2427 ntBASIC20.56■□□□□ 0.88
COL22A1Q8NFW1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL22A1Q8NFW1 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL22A1Q8NFW1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL22A1Q8NFW1 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
COL22A1Q8NFW1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.55■□□□□ 0.88
COL22A1Q8NFW1 ME2P1-201ENST00000426028 1970 ntBASIC20.55■□□□□ 0.88
COL22A1Q8NFW1 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
COL22A1Q8NFW1 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL22A1Q8NFW1 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC20.55■□□□□ 0.88
COL22A1Q8NFW1 IDS-203ENST00000428056 1213 ntTSL 2 BASIC20.55■□□□□ 0.88
COL22A1Q8NFW1 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL22A1Q8NFW1 AL031713.1-201ENST00000564813 661 ntBASIC20.55■□□□□ 0.88
COL22A1Q8NFW1 AL022344.2-201ENST00000568976 968 ntBASIC20.55■□□□□ 0.88
COL22A1Q8NFW1 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC20.55■□□□□ 0.88
COL22A1Q8NFW1 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC20.55■□□□□ 0.88
COL22A1Q8NFW1 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
COL22A1Q8NFW1 UBALD1-205ENST00000590891 2641 ntBASIC20.55■□□□□ 0.88
COL22A1Q8NFW1 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
COL22A1Q8NFW1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL22A1Q8NFW1 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC20.55■□□□□ 0.88
COL22A1Q8NFW1 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL22A1Q8NFW1 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL22A1Q8NFW1 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL22A1Q8NFW1 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.55■□□□□ 0.88
COL22A1Q8NFW1 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL22A1Q8NFW1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL22A1Q8NFW1 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL22A1Q8NFW1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL22A1Q8NFW1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL22A1Q8NFW1 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL22A1Q8NFW1 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL22A1Q8NFW1 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL22A1Q8NFW1 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
COL22A1Q8NFW1 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL22A1Q8NFW1 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC20.54■□□□□ 0.88
COL22A1Q8NFW1 HLA-K-203ENST00000430151 1046 ntBASIC20.54■□□□□ 0.88
COL22A1Q8NFW1 PFN2-205ENST00000461868 613 ntTSL 2 BASIC20.54■□□□□ 0.88
COL22A1Q8NFW1 RPL18AP3-201ENST00000462885 528 ntBASIC20.54■□□□□ 0.88
COL22A1Q8NFW1 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC20.54■□□□□ 0.88
COL22A1Q8NFW1 AC022616.1-201ENST00000518688 554 ntBASIC20.54■□□□□ 0.88
COL22A1Q8NFW1 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC20.54■□□□□ 0.88
COL22A1Q8NFW1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL22A1Q8NFW1 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms