Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 AC087499.6-201ENST00000411576 835 ntBASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 RN7SL399P-201ENST00000471648 279 ntBASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 WASH4P-201ENST00000564273 1246 ntBASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 AC105233.6-201ENST00000642093 218 ntBASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 AL121723.1-201ENST00000445194 1519 ntBASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
ARHGEF39Q8N4T4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 AC093726.1-201ENST00000608064 963 ntBASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
ARHGEF39Q8N4T4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 KRT18P43-201ENST00000469825 1281 ntBASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 ELK1P1-201ENST00000485699 580 ntBASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 AC015910.1-201ENST00000579400 975 ntBASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.88□□□□□ -0.03
ARHGEF39Q8N4T4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms