Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 PRSS29P-201ENST00000440800 595 ntBASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 KRT18P35-201ENST00000510488 1269 ntBASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 AC002347.1-201ENST00000569543 541 ntBASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NUDCD3Q8IVD9 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
NUDCD3Q8IVD9 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.13
NUDCD3Q8IVD9 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NUDCD3Q8IVD9 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
NUDCD3Q8IVD9 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NUDCD3Q8IVD9 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.83■□□□□ 0.13
NUDCD3Q8IVD9 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.83■□□□□ 0.13
NUDCD3Q8IVD9 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 AC109635.5-201ENST00000533593 962 ntBASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 AC012640.2-201ENST00000561606 901 ntBASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 AL009183.1-201ENST00000603760 355 ntBASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 AC026748.1-201ENST00000624349 3251 ntBASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.83■□□□□ 0.12
NUDCD3Q8IVD9 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 AC007686.3-201ENST00000619017 3487 ntBASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 MIR4751-201ENST00000578027 74 ntBASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 KRT8P44-201ENST00000441609 1350 ntBASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 AC013726.1-201ENST00000563747 2285 ntBASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms