Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 TK2-213ENST00000563369 882 ntTSL 5 BASIC14□□□□□ -0.17
LYSMD2Q8IV50 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14□□□□□ -0.17
LYSMD2Q8IV50 AC012306.2-201ENST00000609350 630 ntBASIC14□□□□□ -0.17
LYSMD2Q8IV50 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
LYSMD2Q8IV50 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14□□□□□ -0.17
LYSMD2Q8IV50 AL590326.2-201ENST00000625139 305 ntBASIC14□□□□□ -0.17
LYSMD2Q8IV50 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14□□□□□ -0.17
LYSMD2Q8IV50 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14□□□□□ -0.17
LYSMD2Q8IV50 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14□□□□□ -0.17
LYSMD2Q8IV50 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14□□□□□ -0.17
LYSMD2Q8IV50 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD2Q8IV50 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14□□□□□ -0.17
LYSMD2Q8IV50 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD2Q8IV50 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD2Q8IV50 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD2Q8IV50 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD2Q8IV50 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
LYSMD2Q8IV50 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD2Q8IV50 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14□□□□□ -0.17
LYSMD2Q8IV50 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 AC005521.1-201ENST00000393351 872 ntBASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 RCN1P2-201ENST00000398357 915 ntBASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 VENTXP7-201ENST00000475503 772 ntBASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 MPDU1-223ENST00000582151 728 ntBASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 AC020765.3-201ENST00000613051 740 ntBASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.99□□□□□ -0.17
LYSMD2Q8IV50 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 HAUS4P1-201ENST00000406739 1145 ntBASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 AL353135.1-201ENST00000606729 504 ntBASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms