Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 AC138969.2-201ENST00000532739 9932 ntBASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 ACTG1P14-201ENST00000446382 1122 ntBASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 RNA5SP410-201ENST00000516285 106 ntBASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 AC243562.2-201ENST00000561247 970 ntBASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 MTDHP5-201ENST00000598980 586 ntBASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 AC026120.1-201ENST00000611536 926 ntBASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST3H2AQ7L7L0 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 MCCD1P2-201ENST00000423228 335 ntBASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 GPX1P2-201ENST00000429271 606 ntBASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 C20orf181-201ENST00000623918 480 ntBASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 AC092902.6-201ENST00000641783 218 ntBASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HIST3H2AQ7L7L0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HIST3H2AQ7L7L0 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms