Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RTL6Q6ICC9 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 AC023310.3-201ENST00000557027 670 ntBASIC14.35□□□□□ -0.11
RTL6Q6ICC9 AC100756.1-201ENST00000562736 682 ntBASIC14.35□□□□□ -0.11
RTL6Q6ICC9 AC138749.3-201ENST00000567691 622 ntBASIC14.35□□□□□ -0.11
RTL6Q6ICC9 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 AC116165.1-201ENST00000611806 668 ntBASIC14.35□□□□□ -0.11
RTL6Q6ICC9 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTL6Q6ICC9 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 NORAD-201ENST00000565493 5339 ntBASIC14.34□□□□□ -0.11
RTL6Q6ICC9 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 U91328.1-201ENST00000437528 223 ntBASIC14.34□□□□□ -0.11
RTL6Q6ICC9 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 INE1-201ENST00000456273 945 ntBASIC14.34□□□□□ -0.11
RTL6Q6ICC9 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 TPRX2P-201ENST00000535362 881 ntBASIC14.34□□□□□ -0.11
RTL6Q6ICC9 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 AC025048.3-201ENST00000590609 569 ntBASIC14.34□□□□□ -0.11
RTL6Q6ICC9 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 AC005702.4-201ENST00000618393 416 ntBASIC14.34□□□□□ -0.11
RTL6Q6ICC9 IGHV3-72-202ENST00000621503 303 ntBASIC14.34□□□□□ -0.11
RTL6Q6ICC9 AC007431.3-201ENST00000623221 587 ntBASIC14.34□□□□□ -0.11
RTL6Q6ICC9 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms