Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 TBCB-205ENST00000585746 875 ntTSL 3 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 AC004706.3-202ENST00000621574 984 ntBASIC12.7□□□□□ -0.38
FAM78BQ5VT40 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 ARTN-206ENST00000472435 402 ntTSL 3 BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 AL160237.2-201ENST00000556165 472 ntBASIC12.69□□□□□ -0.38
FAM78BQ5VT40 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 MTDHP4-201ENST00000600287 670 ntBASIC12.69□□□□□ -0.38
FAM78BQ5VT40 IFNL4P1-201ENST00000607083 540 ntBASIC12.69□□□□□ -0.38
FAM78BQ5VT40 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.69□□□□□ -0.38
FAM78BQ5VT40 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.68□□□□□ -0.38
FAM78BQ5VT40 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
FAM78BQ5VT40 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FAM78BQ5VT40 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.68□□□□□ -0.38
FAM78BQ5VT40 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM78BQ5VT40 AC129492.6-201ENST00000611383 1305 ntBASIC12.68□□□□□ -0.38
FAM78BQ5VT40 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FAM78BQ5VT40 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM78BQ5VT40 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM78BQ5VT40 AC015656.1-201ENST00000624209 3578 ntBASIC12.68□□□□□ -0.38
FAM78BQ5VT40 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM78BQ5VT40 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM78BQ5VT40 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM78BQ5VT40 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
FAM78BQ5VT40 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.68□□□□□ -0.38
FAM78BQ5VT40 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM78BQ5VT40 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM78BQ5VT40 AKR1C7P-201ENST00000305623 895 ntBASIC12.68□□□□□ -0.38
FAM78BQ5VT40 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM78BQ5VT40 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms