Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC00242Q5T6M2 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
LINC00242Q5T6M2 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
LINC00242Q5T6M2 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LINC00242Q5T6M2 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
LINC00242Q5T6M2 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LINC00242Q5T6M2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
LINC00242Q5T6M2 MROH4P-201ENST00000431302 1578 ntBASIC10.9□□□□□ -0.67
LINC00242Q5T6M2 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC10.9□□□□□ -0.67
LINC00242Q5T6M2 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
LINC00242Q5T6M2 COCH-203ENST00000460581 2688 ntTSL 2 BASIC10.9□□□□□ -0.67
LINC00242Q5T6M2 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LINC00242Q5T6M2 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LINC00242Q5T6M2 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC10.9□□□□□ -0.67
LINC00242Q5T6M2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
LINC00242Q5T6M2 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LINC00242Q5T6M2 AC018892.3-201ENST00000623986 2499 ntBASIC10.9□□□□□ -0.67
LINC00242Q5T6M2 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LINC00242Q5T6M2 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 AC007191.1-201ENST00000623179 2995 ntBASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 PMS2P7-201ENST00000506558 1336 ntBASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 FGD5P1-202ENST00000614866 2498 ntBASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 AC148477.4-201ENST00000613430 1793 ntBASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC00242Q5T6M2 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms