Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RFX4Q33E94 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.84□□□□□ -0.03
RFX4Q33E94 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RFX4Q33E94 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RFX4Q33E94 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
RFX4Q33E94 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFX4Q33E94 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFX4Q33E94 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
RFX4Q33E94 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RFX4Q33E94 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.83□□□□□ -0.03
RFX4Q33E94 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
RFX4Q33E94 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RFX4Q33E94 AC092127.1-201ENST00000567093 3455 ntBASIC14.83□□□□□ -0.03
RFX4Q33E94 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
RFX4Q33E94 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.83□□□□□ -0.03
RFX4Q33E94 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
RFX4Q33E94 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.83□□□□□ -0.03
RFX4Q33E94 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RFX4Q33E94 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RFX4Q33E94 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.83□□□□□ -0.04
RFX4Q33E94 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFX4Q33E94 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFX4Q33E94 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.83□□□□□ -0.04
RFX4Q33E94 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.83□□□□□ -0.04
RFX4Q33E94 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFX4Q33E94 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFX4Q33E94 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RFX4Q33E94 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.83□□□□□ -0.04
RFX4Q33E94 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.83□□□□□ -0.04
RFX4Q33E94 AC018712.1-201ENST00000455767 687 ntBASIC14.83□□□□□ -0.04
RFX4Q33E94 AC108073.2-201ENST00000464002 357 ntBASIC14.83□□□□□ -0.04
RFX4Q33E94 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.83□□□□□ -0.04
RFX4Q33E94 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.83□□□□□ -0.04
RFX4Q33E94 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFX4Q33E94 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
RFX4Q33E94 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RFX4Q33E94 AC012640.2-201ENST00000561606 901 ntBASIC14.83□□□□□ -0.04
RFX4Q33E94 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.83□□□□□ -0.04
RFX4Q33E94 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.83□□□□□ -0.04
RFX4Q33E94 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.83□□□□□ -0.04
RFX4Q33E94 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.83□□□□□ -0.04
RFX4Q33E94 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.83□□□□□ -0.04
RFX4Q33E94 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFX4Q33E94 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFX4Q33E94 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.83□□□□□ -0.04
RFX4Q33E94 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RFX4Q33E94 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFX4Q33E94 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFX4Q33E94 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
RFX4Q33E94 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.83□□□□□ -0.04
RFX4Q33E94 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RFX4Q33E94 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RFX4Q33E94 WASH6P-202ENST00000359512 1437 ntBASIC14.83□□□□□ -0.04
RFX4Q33E94 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RFX4Q33E94 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.83□□□□□ -0.04
RFX4Q33E94 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFX4Q33E94 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.83□□□□□ -0.04
RFX4Q33E94 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RFX4Q33E94 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RFX4Q33E94 AC067750.1-201ENST00000608826 6545 ntBASIC14.83□□□□□ -0.04
RFX4Q33E94 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFX4Q33E94 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
RFX4Q33E94 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RFX4Q33E94 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.82□□□□□ -0.04
RFX4Q33E94 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFX4Q33E94 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RFX4Q33E94 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.82□□□□□ -0.04
RFX4Q33E94 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.82□□□□□ -0.04
RFX4Q33E94 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFX4Q33E94 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFX4Q33E94 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFX4Q33E94 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFX4Q33E94 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFX4Q33E94 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFX4Q33E94 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
RFX4Q33E94 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFX4Q33E94 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFX4Q33E94 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFX4Q33E94 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RFX4Q33E94 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
RFX4Q33E94 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFX4Q33E94 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFX4Q33E94 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.82□□□□□ -0.04
RFX4Q33E94 RNU1-129P-201ENST00000384064 167 ntBASIC14.82□□□□□ -0.04
RFX4Q33E94 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.82□□□□□ -0.04
RFX4Q33E94 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.82□□□□□ -0.04
RFX4Q33E94 HMGA1P7-201ENST00000406908 502 ntBASIC14.82□□□□□ -0.04
RFX4Q33E94 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.82□□□□□ -0.04
RFX4Q33E94 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.82□□□□□ -0.04
RFX4Q33E94 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.82□□□□□ -0.04
RFX4Q33E94 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RFX4Q33E94 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.82□□□□□ -0.04
RFX4Q33E94 UNC93B7-201ENST00000509439 705 ntBASIC14.82□□□□□ -0.04
RFX4Q33E94 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.82□□□□□ -0.04
RFX4Q33E94 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.82□□□□□ -0.04
RFX4Q33E94 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.82□□□□□ -0.04
RFX4Q33E94 MIR3909-201ENST00000579518 119 ntBASIC14.82□□□□□ -0.04
RFX4Q33E94 U1.21-201ENST00000580816 167 ntBASIC14.82□□□□□ -0.04
RFX4Q33E94 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RFX4Q33E94 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms