Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LTBQ06643 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LTBQ06643 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LTBQ06643 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LTBQ06643 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LTBQ06643 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LTBQ06643 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LTBQ06643 FAM220BP-201ENST00000377689 816 ntBASIC14.54□□□□□ -0.08
LTBQ06643 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.54□□□□□ -0.08
LTBQ06643 AC002472.2-201ENST00000442739 958 ntBASIC14.54□□□□□ -0.08
LTBQ06643 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.54□□□□□ -0.08
LTBQ06643 AC067863.1-201ENST00000494933 530 ntBASIC14.54□□□□□ -0.08
LTBQ06643 AC024267.1-201ENST00000582320 895 ntBASIC14.54□□□□□ -0.08
LTBQ06643 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.54□□□□□ -0.08
LTBQ06643 AL390955.2-201ENST00000603032 514 ntBASIC14.54□□□□□ -0.08
LTBQ06643 MIR6752-201ENST00000618442 71 ntBASIC14.54□□□□□ -0.08
LTBQ06643 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
LTBQ06643 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.54□□□□□ -0.08
LTBQ06643 AC105339.1-204ENST00000636249 355 ntBASIC14.54□□□□□ -0.08
LTBQ06643 AC084121.4-201ENST00000641598 221 ntBASIC14.54□□□□□ -0.08
LTBQ06643 AF228730.8-201ENST00000642140 221 ntBASIC14.54□□□□□ -0.08
LTBQ06643 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LTBQ06643 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LTBQ06643 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LTBQ06643 AL691432.1-201ENST00000596308 1422 ntBASIC14.54□□□□□ -0.08
LTBQ06643 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LTBQ06643 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LTBQ06643 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
LTBQ06643 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LTBQ06643 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LTBQ06643 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LTBQ06643 AC011477.6-201ENST00000604980 1927 ntBASIC14.54□□□□□ -0.08
LTBQ06643 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LTBQ06643 AC126177.1-201ENST00000547829 2218 ntBASIC14.54□□□□□ -0.08
LTBQ06643 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LTBQ06643 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.54□□□□□ -0.08
LTBQ06643 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
LTBQ06643 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LTBQ06643 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LTBQ06643 AC023824.1-201ENST00000562945 2975 ntBASIC14.54□□□□□ -0.08
LTBQ06643 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.54□□□□□ -0.08
LTBQ06643 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LTBQ06643 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LTBQ06643 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LTBQ06643 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBQ06643 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBQ06643 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.53□□□□□ -0.08
LTBQ06643 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LTBQ06643 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.53□□□□□ -0.08
LTBQ06643 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBQ06643 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
LTBQ06643 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.53□□□□□ -0.08
LTBQ06643 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.53□□□□□ -0.08
LTBQ06643 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LTBQ06643 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBQ06643 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBQ06643 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBQ06643 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.53□□□□□ -0.08
LTBQ06643 AP3S2-216ENST00000617003 1561 ntBASIC14.53□□□□□ -0.08
LTBQ06643 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBQ06643 AP001282.1-201ENST00000531301 1499 ntBASIC14.53□□□□□ -0.08
LTBQ06643 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LTBQ06643 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBQ06643 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.53□□□□□ -0.08
LTBQ06643 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBQ06643 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LTBQ06643 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBQ06643 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
LTBQ06643 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.53□□□□□ -0.08
LTBQ06643 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.53□□□□□ -0.08
LTBQ06643 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBQ06643 AC245100.3-201ENST00000441281 285 ntBASIC14.53□□□□□ -0.08
LTBQ06643 AL592309.1-201ENST00000443127 649 ntBASIC14.53□□□□□ -0.08
LTBQ06643 AC023141.5-201ENST00000458585 616 ntBASIC14.53□□□□□ -0.08
LTBQ06643 MEIS3P1-201ENST00000495167 958 ntBASIC14.53□□□□□ -0.08
LTBQ06643 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.53□□□□□ -0.08
LTBQ06643 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.53□□□□□ -0.08
LTBQ06643 SLC25A39P2-201ENST00000537614 270 ntBASIC14.53□□□□□ -0.08
LTBQ06643 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.53□□□□□ -0.08
LTBQ06643 DUX4L27-201ENST00000554796 1261 ntBASIC14.53□□□□□ -0.08
LTBQ06643 KRT8P23-201ENST00000560090 1207 ntBASIC14.53□□□□□ -0.08
LTBQ06643 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBQ06643 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.53□□□□□ -0.08
LTBQ06643 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBQ06643 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.53□□□□□ -0.08
LTBQ06643 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LTBQ06643 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LTBQ06643 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LTBQ06643 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBQ06643 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBQ06643 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBQ06643 AC144831.1-201ENST00000573312 2656 ntBASIC14.53□□□□□ -0.08
LTBQ06643 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LTBQ06643 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.53□□□□□ -0.08
LTBQ06643 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LTBQ06643 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
LTBQ06643 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.53□□□□□ -0.08
LTBQ06643 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LTBQ06643 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LTBQ06643 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 854.1 ms