Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.17□□□□□ -0.14
CSNK1A1P48729 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSNK1A1P48729 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.17□□□□□ -0.14
CSNK1A1P48729 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.17□□□□□ -0.14
CSNK1A1P48729 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.17□□□□□ -0.14
CSNK1A1P48729 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CSNK1A1P48729 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSNK1A1P48729 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSNK1A1P48729 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.17□□□□□ -0.14
CSNK1A1P48729 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.17□□□□□ -0.14
CSNK1A1P48729 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CSNK1A1P48729 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CSNK1A1P48729 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.17□□□□□ -0.14
CSNK1A1P48729 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CSNK1A1P48729 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CSNK1A1P48729 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSNK1A1P48729 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.17□□□□□ -0.14
CSNK1A1P48729 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.16□□□□□ -0.14
CSNK1A1P48729 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1A1P48729 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1A1P48729 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1A1P48729 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1A1P48729 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1A1P48729 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CSNK1A1P48729 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CSNK1A1P48729 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1A1P48729 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1A1P48729 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1A1P48729 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CSNK1A1P48729 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1A1P48729 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1A1P48729 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1A1P48729 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1A1P48729 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1A1P48729 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CSNK1A1P48729 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1A1P48729 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1A1P48729 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1A1P48729 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1A1P48729 CNN2P2-201ENST00000443536 909 ntBASIC14.16□□□□□ -0.14
CSNK1A1P48729 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1A1P48729 CNN2P3-201ENST00000450201 906 ntBASIC14.16□□□□□ -0.14
CSNK1A1P48729 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.16□□□□□ -0.14
CSNK1A1P48729 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.16□□□□□ -0.14
CSNK1A1P48729 AC109322.1-201ENST00000524499 1264 ntBASIC14.16□□□□□ -0.14
CSNK1A1P48729 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.16□□□□□ -0.14
CSNK1A1P48729 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CSNK1A1P48729 AC025678.2-201ENST00000562061 970 ntBASIC14.16□□□□□ -0.14
CSNK1A1P48729 AL450472.2-201ENST00000603663 1156 ntBASIC14.16□□□□□ -0.14
CSNK1A1P48729 AL136317.3-201ENST00000618497 906 ntBASIC14.16□□□□□ -0.14
CSNK1A1P48729 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.16□□□□□ -0.14
CSNK1A1P48729 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1A1P48729 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1A1P48729 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CSNK1A1P48729 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1A1P48729 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1A1P48729 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1A1P48729 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1A1P48729 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
CSNK1A1P48729 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1A1P48729 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
CSNK1A1P48729 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1A1P48729 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1A1P48729 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CSNK1A1P48729 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
CSNK1A1P48729 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1A1P48729 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1A1P48729 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CSNK1A1P48729 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CSNK1A1P48729 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1A1P48729 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1A1P48729 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1A1P48729 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1A1P48729 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1A1P48729 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1A1P48729 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.15□□□□□ -0.14
CSNK1A1P48729 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.15□□□□□ -0.14
CSNK1A1P48729 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1A1P48729 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1A1P48729 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.15□□□□□ -0.14
CSNK1A1P48729 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1A1P48729 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1A1P48729 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.15□□□□□ -0.14
CSNK1A1P48729 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.15□□□□□ -0.14
CSNK1A1P48729 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1A1P48729 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1A1P48729 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1A1P48729 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1A1P48729 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.15□□□□□ -0.14
CSNK1A1P48729 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
CSNK1A1P48729 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CSNK1A1P48729 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1A1P48729 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.15□□□□□ -0.14
CSNK1A1P48729 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CSNK1A1P48729 EEF1DP4-201ENST00000446006 880 ntBASIC14.15□□□□□ -0.14
CSNK1A1P48729 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.15□□□□□ -0.14
CSNK1A1P48729 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.15□□□□□ -0.14
CSNK1A1P48729 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.15□□□□□ -0.14
CSNK1A1P48729 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.15□□□□□ -0.14
CSNK1A1P48729 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms