Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
RFC3P40938 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.58□□□□□ -0.08
RFC3P40938 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
RFC3P40938 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RFC3P40938 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFC3P40938 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFC3P40938 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RFC3P40938 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.58□□□□□ -0.08
RFC3P40938 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.58□□□□□ -0.08
RFC3P40938 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.58□□□□□ -0.08
RFC3P40938 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFC3P40938 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFC3P40938 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFC3P40938 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.58□□□□□ -0.08
RFC3P40938 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFC3P40938 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFC3P40938 DGCR5-201ENST00000399539 862 ntBASIC14.58□□□□□ -0.08
RFC3P40938 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.58□□□□□ -0.08
RFC3P40938 AL353779.1-201ENST00000434793 351 ntBASIC14.58□□□□□ -0.08
RFC3P40938 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.58□□□□□ -0.08
RFC3P40938 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.58□□□□□ -0.08
RFC3P40938 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.58□□□□□ -0.08
RFC3P40938 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.58□□□□□ -0.08
RFC3P40938 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.58□□□□□ -0.08
RFC3P40938 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.58□□□□□ -0.08
RFC3P40938 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFC3P40938 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.08
RFC3P40938 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.58□□□□□ -0.08
RFC3P40938 TPRX2P-201ENST00000535362 881 ntBASIC14.58□□□□□ -0.08
RFC3P40938 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
RFC3P40938 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.58□□□□□ -0.08
RFC3P40938 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RFC3P40938 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.58□□□□□ -0.08
RFC3P40938 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFC3P40938 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
RFC3P40938 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFC3P40938 AC007431.3-201ENST00000623221 587 ntBASIC14.58□□□□□ -0.08
RFC3P40938 AL358472.5-202ENST00000641448 1267 ntBASIC14.58□□□□□ -0.08
RFC3P40938 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFC3P40938 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.58□□□□□ -0.08
RFC3P40938 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RFC3P40938 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RFC3P40938 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RFC3P40938 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RFC3P40938 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFC3P40938 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFC3P40938 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RFC3P40938 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFC3P40938 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
RFC3P40938 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RFC3P40938 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.58□□□□□ -0.08
RFC3P40938 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.58□□□□□ -0.08
RFC3P40938 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFC3P40938 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFC3P40938 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFC3P40938 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.57□□□□□ -0.08
RFC3P40938 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RFC3P40938 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFC3P40938 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFC3P40938 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RFC3P40938 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RFC3P40938 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RFC3P40938 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.57□□□□□ -0.08
RFC3P40938 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RFC3P40938 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RFC3P40938 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFC3P40938 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RFC3P40938 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RFC3P40938 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RFC3P40938 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFC3P40938 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFC3P40938 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
RFC3P40938 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFC3P40938 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.57□□□□□ -0.08
RFC3P40938 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFC3P40938 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.57□□□□□ -0.08
RFC3P40938 COX5BP8-201ENST00000416911 349 ntBASIC14.57□□□□□ -0.08
RFC3P40938 DFFBP1-201ENST00000433250 979 ntBASIC14.57□□□□□ -0.08
RFC3P40938 HIST3H2BA-201ENST00000436555 524 ntBASIC14.57□□□□□ -0.08
RFC3P40938 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.57□□□□□ -0.08
RFC3P40938 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RFC3P40938 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.57□□□□□ -0.08
RFC3P40938 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.57□□□□□ -0.08
RFC3P40938 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.57□□□□□ -0.08
RFC3P40938 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.57□□□□□ -0.08
RFC3P40938 AC023310.3-201ENST00000557027 670 ntBASIC14.57□□□□□ -0.08
RFC3P40938 AC100756.1-201ENST00000562736 682 ntBASIC14.57□□□□□ -0.08
RFC3P40938 AC138749.3-201ENST00000567691 622 ntBASIC14.57□□□□□ -0.08
RFC3P40938 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.57□□□□□ -0.08
RFC3P40938 AC116165.1-201ENST00000611806 668 ntBASIC14.57□□□□□ -0.08
RFC3P40938 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.57□□□□□ -0.08
RFC3P40938 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFC3P40938 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.57□□□□□ -0.08
RFC3P40938 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.57□□□□□ -0.08
RFC3P40938 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFC3P40938 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
RFC3P40938 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RFC3P40938 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
RFC3P40938 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RFC3P40938 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms