Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
COL15A1P39059 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
COL15A1P39059 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL15A1P39059 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL15A1P39059 AL133267.1-201ENST00000398220 340 ntBASIC19.88■□□□□ 0.77
COL15A1P39059 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL15A1P39059 AC004945.1-201ENST00000416738 983 ntBASIC19.88■□□□□ 0.77
COL15A1P39059 AC078819.1-201ENST00000547454 765 ntBASIC19.88■□□□□ 0.77
COL15A1P39059 AC012085.1-201ENST00000548270 765 ntBASIC19.88■□□□□ 0.77
COL15A1P39059 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC19.88■□□□□ 0.77
COL15A1P39059 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL15A1P39059 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC19.88■□□□□ 0.77
COL15A1P39059 KSR1-207ENST00000578981 748 ntTSL 4 BASIC19.88■□□□□ 0.77
COL15A1P39059 AL118558.3-201ENST00000607414 1079 ntBASIC19.88■□□□□ 0.77
COL15A1P39059 AC138951.2-201ENST00000623455 1161 ntBASIC19.88■□□□□ 0.77
COL15A1P39059 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL15A1P39059 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL15A1P39059 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL15A1P39059 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC19.88■□□□□ 0.77
COL15A1P39059 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.88■□□□□ 0.77
COL15A1P39059 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL15A1P39059 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL15A1P39059 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC19.88■□□□□ 0.77
COL15A1P39059 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL15A1P39059 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL15A1P39059 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL15A1P39059 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL15A1P39059 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL15A1P39059 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.88■□□□□ 0.77
COL15A1P39059 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC19.88■□□□□ 0.77
COL15A1P39059 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL15A1P39059 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL15A1P39059 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL15A1P39059 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL15A1P39059 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL15A1P39059 HTR7P1-202ENST00000624664 4411 ntBASIC19.87■□□□□ 0.77
COL15A1P39059 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.87■□□□□ 0.77
COL15A1P39059 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL15A1P39059 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL15A1P39059 PFN2-215ENST00000497148 743 ntTSL 4 BASIC19.87■□□□□ 0.77
COL15A1P39059 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC19.87■□□□□ 0.77
COL15A1P39059 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL15A1P39059 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC19.87■□□□□ 0.77
COL15A1P39059 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
COL15A1P39059 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC19.87■□□□□ 0.77
COL15A1P39059 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC19.87■□□□□ 0.77
COL15A1P39059 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC19.87■□□□□ 0.77
COL15A1P39059 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC19.87■□□□□ 0.77
COL15A1P39059 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC19.87■□□□□ 0.77
COL15A1P39059 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL15A1P39059 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL15A1P39059 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL15A1P39059 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL15A1P39059 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL15A1P39059 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
COL15A1P39059 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL15A1P39059 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
COL15A1P39059 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL15A1P39059 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
COL15A1P39059 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
COL15A1P39059 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL15A1P39059 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.87■□□□□ 0.77
COL15A1P39059 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
COL15A1P39059 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL15A1P39059 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL15A1P39059 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL15A1P39059 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
COL15A1P39059 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL15A1P39059 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL15A1P39059 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
COL15A1P39059 AC006001.1-201ENST00000325130 474 ntBASIC19.86■□□□□ 0.77
COL15A1P39059 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL15A1P39059 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL15A1P39059 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL15A1P39059 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
COL15A1P39059 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL15A1P39059 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC19.86■□□□□ 0.77
COL15A1P39059 PGGT1BP2-201ENST00000398621 1028 ntBASIC19.86■□□□□ 0.77
COL15A1P39059 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC19.86■□□□□ 0.77
COL15A1P39059 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL15A1P39059 Z93015.1-201ENST00000451718 390 ntBASIC19.86■□□□□ 0.77
COL15A1P39059 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL15A1P39059 KRT8P13-201ENST00000463294 1010 ntBASIC19.86■□□□□ 0.77
COL15A1P39059 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC19.86■□□□□ 0.77
COL15A1P39059 GAPDHP40-201ENST00000505218 1006 ntBASIC19.86■□□□□ 0.77
COL15A1P39059 AC023310.1-201ENST00000554836 735 ntBASIC19.86■□□□□ 0.77
COL15A1P39059 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC19.86■□□□□ 0.77
COL15A1P39059 TK1-203ENST00000588734 1681 ntTSL 2 BASIC19.86■□□□□ 0.77
COL15A1P39059 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL15A1P39059 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC19.86■□□□□ 0.77
COL15A1P39059 PRKN-211ENST00000615065 261 ntTSL 5 BASIC19.86■□□□□ 0.77
COL15A1P39059 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL15A1P39059 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
COL15A1P39059 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
COL15A1P39059 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL15A1P39059 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
COL15A1P39059 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL15A1P39059 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
COL15A1P39059 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL15A1P39059 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms