Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCNN1AP37088 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.44■□□□□ 0.22
SCNN1AP37088 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SCNN1AP37088 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SCNN1AP37088 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SCNN1AP37088 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SCNN1AP37088 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCNN1AP37088 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.44■□□□□ 0.22
SCNN1AP37088 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SCNN1AP37088 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
SCNN1AP37088 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SCNN1AP37088 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.44■□□□□ 0.22
SCNN1AP37088 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SCNN1AP37088 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCNN1AP37088 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCNN1AP37088 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCNN1AP37088 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCNN1AP37088 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCNN1AP37088 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.43■□□□□ 0.22
SCNN1AP37088 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCNN1AP37088 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCNN1AP37088 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SCNN1AP37088 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SCNN1AP37088 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.43■□□□□ 0.22
SCNN1AP37088 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCNN1AP37088 PAUPAR-201ENST00000630360 2965 ntBASIC16.43■□□□□ 0.22
SCNN1AP37088 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.43■□□□□ 0.22
SCNN1AP37088 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
SCNN1AP37088 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SCNN1AP37088 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCNN1AP37088 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.43■□□□□ 0.22
SCNN1AP37088 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SCNN1AP37088 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
SCNN1AP37088 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SCNN1AP37088 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.43■□□□□ 0.22
SCNN1AP37088 MIR770-201ENST00000390219 98 ntBASIC16.43■□□□□ 0.22
SCNN1AP37088 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SCNN1AP37088 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.43■□□□□ 0.22
SCNN1AP37088 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.43■□□□□ 0.22
SCNN1AP37088 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.43■□□□□ 0.22
SCNN1AP37088 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SCNN1AP37088 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SCNN1AP37088 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.43■□□□□ 0.22
SCNN1AP37088 AC135586.1-201ENST00000539323 574 ntBASIC16.43■□□□□ 0.22
SCNN1AP37088 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SCNN1AP37088 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.43■□□□□ 0.22
SCNN1AP37088 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.43■□□□□ 0.22
SCNN1AP37088 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.43■□□□□ 0.22
SCNN1AP37088 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.43■□□□□ 0.22
SCNN1AP37088 SRD5A3P1-201ENST00000603021 949 ntBASIC16.43■□□□□ 0.22
SCNN1AP37088 AL391069.4-201ENST00000609583 481 ntBASIC16.43■□□□□ 0.22
SCNN1AP37088 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCNN1AP37088 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCNN1AP37088 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCNN1AP37088 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.43■□□□□ 0.22
SCNN1AP37088 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCNN1AP37088 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.43■□□□□ 0.22
SCNN1AP37088 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SCNN1AP37088 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.43■□□□□ 0.22
SCNN1AP37088 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCNN1AP37088 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCNN1AP37088 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.42■□□□□ 0.22
SCNN1AP37088 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SCNN1AP37088 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.42■□□□□ 0.22
SCNN1AP37088 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.42■□□□□ 0.22
SCNN1AP37088 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SCNN1AP37088 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SCNN1AP37088 AC009090.5-201ENST00000624886 2285 ntBASIC16.42■□□□□ 0.22
SCNN1AP37088 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCNN1AP37088 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCNN1AP37088 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCNN1AP37088 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCNN1AP37088 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.42■□□□□ 0.22
SCNN1AP37088 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCNN1AP37088 MEIS3P1-201ENST00000495167 958 ntBASIC16.42■□□□□ 0.22
SCNN1AP37088 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCNN1AP37088 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCNN1AP37088 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.42■□□□□ 0.22
SCNN1AP37088 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.42■□□□□ 0.22
SCNN1AP37088 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SCNN1AP37088 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCNN1AP37088 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCNN1AP37088 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.42■□□□□ 0.22
SCNN1AP37088 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCNN1AP37088 AC008741.2-201ENST00000612792 3115 ntBASIC16.42■□□□□ 0.22
SCNN1AP37088 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCNN1AP37088 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCNN1AP37088 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.42■□□□□ 0.22
SCNN1AP37088 AC084364.1-201ENST00000551967 1556 ntBASIC16.42■□□□□ 0.22
SCNN1AP37088 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCNN1AP37088 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCNN1AP37088 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCNN1AP37088 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCNN1AP37088 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SCNN1AP37088 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCNN1AP37088 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCNN1AP37088 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SCNN1AP37088 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCNN1AP37088 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCNN1AP37088 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms