Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
HLA-DMAP28067 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DMAP28067 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DMAP28067 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DMAP28067 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.82□□□□□ -0.2
HLA-DMAP28067 CR383656.2-201ENST00000548656 2254 ntBASIC13.82□□□□□ -0.2
HLA-DMAP28067 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DMAP28067 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DMAP28067 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DMAP28067 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DMAP28067 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.82□□□□□ -0.2
HLA-DMAP28067 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DMAP28067 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC13.82□□□□□ -0.2
HLA-DMAP28067 DRAXINP1-201ENST00000437611 948 ntBASIC13.82□□□□□ -0.2
HLA-DMAP28067 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.82□□□□□ -0.2
HLA-DMAP28067 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DMAP28067 LINC00265-3P-201ENST00000447588 903 ntBASIC13.82□□□□□ -0.2
HLA-DMAP28067 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DMAP28067 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
HLA-DMAP28067 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DMAP28067 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DMAP28067 AC093827.2-201ENST00000512654 315 ntBASIC13.82□□□□□ -0.2
HLA-DMAP28067 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DMAP28067 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.82□□□□□ -0.2
HLA-DMAP28067 TPSP2-201ENST00000561760 610 ntBASIC13.82□□□□□ -0.2
HLA-DMAP28067 AC074051.2-201ENST00000565115 352 ntBASIC13.82□□□□□ -0.2
HLA-DMAP28067 AL139424.1-201ENST00000607572 797 ntBASIC13.82□□□□□ -0.2
HLA-DMAP28067 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DMAP28067 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
HLA-DMAP28067 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HLA-DMAP28067 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.82□□□□□ -0.2
HLA-DMAP28067 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DMAP28067 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DMAP28067 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DMAP28067 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DMAP28067 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.82□□□□□ -0.2
HLA-DMAP28067 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DMAP28067 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.82□□□□□ -0.2
HLA-DMAP28067 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.82□□□□□ -0.2
HLA-DMAP28067 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DMAP28067 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DMAP28067 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.82□□□□□ -0.2
HLA-DMAP28067 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.82□□□□□ -0.2
HLA-DMAP28067 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.82□□□□□ -0.2
HLA-DMAP28067 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.82□□□□□ -0.2
HLA-DMAP28067 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DMAP28067 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
HLA-DMAP28067 LINC01230-201ENST00000625222 3017 ntBASIC13.82□□□□□ -0.2
HLA-DMAP28067 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DMAP28067 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DMAP28067 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.81□□□□□ -0.2
HLA-DMAP28067 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DMAP28067 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DMAP28067 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DMAP28067 AL353732.1-201ENST00000569618 1459 ntBASIC13.81□□□□□ -0.2
HLA-DMAP28067 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DMAP28067 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DMAP28067 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DMAP28067 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DMAP28067 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DMAP28067 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.81□□□□□ -0.2
HLA-DMAP28067 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HLA-DMAP28067 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.81□□□□□ -0.2
HLA-DMAP28067 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DMAP28067 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
HLA-DMAP28067 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
HLA-DMAP28067 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DMAP28067 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.81□□□□□ -0.2
HLA-DMAP28067 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.81□□□□□ -0.2
HLA-DMAP28067 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.81□□□□□ -0.2
HLA-DMAP28067 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DMAP28067 CICP8-201ENST00000455800 2813 ntBASIC13.81□□□□□ -0.2
HLA-DMAP28067 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DMAP28067 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DMAP28067 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DMAP28067 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DMAP28067 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DMAP28067 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
HLA-DMAP28067 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
HLA-DMAP28067 TSSC2-201ENST00000450217 709 ntBASIC13.81□□□□□ -0.2
HLA-DMAP28067 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.81□□□□□ -0.2
HLA-DMAP28067 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.81□□□□□ -0.2
HLA-DMAP28067 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.81□□□□□ -0.2
HLA-DMAP28067 AC087641.1-201ENST00000557561 1021 ntBASIC13.81□□□□□ -0.2
HLA-DMAP28067 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
HLA-DMAP28067 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
HLA-DMAP28067 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DMAP28067 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.81□□□□□ -0.2
HLA-DMAP28067 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DMAP28067 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.81□□□□□ -0.2
HLA-DMAP28067 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DMAP28067 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DMAP28067 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DMAP28067 PI4KAP1-204ENST00000612579 1703 ntBASIC13.81□□□□□ -0.2
HLA-DMAP28067 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DMAP28067 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DMAP28067 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.81□□□□□ -0.2
HLA-DMAP28067 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.81□□□□□ -0.2
HLA-DMAP28067 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DMAP28067 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms