Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
GDF1P27539 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.39□□□□□ -0.11
GDF1P27539 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
GDF1P27539 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.39□□□□□ -0.11
GDF1P27539 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.39□□□□□ -0.11
GDF1P27539 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.39□□□□□ -0.11
GDF1P27539 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.39□□□□□ -0.11
GDF1P27539 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.39□□□□□ -0.11
GDF1P27539 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.39□□□□□ -0.11
GDF1P27539 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.39□□□□□ -0.11
GDF1P27539 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.39□□□□□ -0.11
GDF1P27539 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
GDF1P27539 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.39□□□□□ -0.11
GDF1P27539 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.39□□□□□ -0.11
GDF1P27539 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.39□□□□□ -0.11
GDF1P27539 RN7SL692P-201ENST00000464677 288 ntBASIC14.39□□□□□ -0.11
GDF1P27539 MEIS3P1-201ENST00000495167 958 ntBASIC14.39□□□□□ -0.11
GDF1P27539 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.39□□□□□ -0.11
GDF1P27539 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.39□□□□□ -0.11
GDF1P27539 AP005018.1-201ENST00000525475 301 ntBASIC14.39□□□□□ -0.11
GDF1P27539 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.39□□□□□ -0.11
GDF1P27539 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.39□□□□□ -0.11
GDF1P27539 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.39□□□□□ -0.11
GDF1P27539 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
GDF1P27539 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
GDF1P27539 AC005225.4-201ENST00000557330 545 ntBASIC14.39□□□□□ -0.11
GDF1P27539 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.39□□□□□ -0.11
GDF1P27539 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.39□□□□□ -0.11
GDF1P27539 AC007431.3-201ENST00000623221 587 ntBASIC14.39□□□□□ -0.11
GDF1P27539 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.39□□□□□ -0.11
GDF1P27539 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.39□□□□□ -0.11
GDF1P27539 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
GDF1P27539 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
GDF1P27539 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.39□□□□□ -0.11
GDF1P27539 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
GDF1P27539 AL118508.1-201ENST00000613502 2345 ntBASIC14.38□□□□□ -0.11
GDF1P27539 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
GDF1P27539 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.38□□□□□ -0.11
GDF1P27539 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.38□□□□□ -0.11
GDF1P27539 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.38□□□□□ -0.11
GDF1P27539 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
GDF1P27539 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
GDF1P27539 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.38□□□□□ -0.11
GDF1P27539 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.38□□□□□ -0.11
GDF1P27539 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.38□□□□□ -0.11
GDF1P27539 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.38□□□□□ -0.11
GDF1P27539 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.38□□□□□ -0.11
GDF1P27539 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.38□□□□□ -0.11
GDF1P27539 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.38□□□□□ -0.11
GDF1P27539 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.38□□□□□ -0.11
GDF1P27539 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
GDF1P27539 AC005034.1-201ENST00000426657 489 ntBASIC14.38□□□□□ -0.11
GDF1P27539 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.38□□□□□ -0.11
GDF1P27539 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.38□□□□□ -0.11
GDF1P27539 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
GDF1P27539 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.38□□□□□ -0.11
GDF1P27539 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
GDF1P27539 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.38□□□□□ -0.11
GDF1P27539 TP53TG3HP-202ENST00000569755 579 ntBASIC14.38□□□□□ -0.11
GDF1P27539 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.38□□□□□ -0.11
GDF1P27539 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.38□□□□□ -0.11
GDF1P27539 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.38□□□□□ -0.11
GDF1P27539 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
GDF1P27539 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms