Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
GDF1P27539 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.39□□□□□ -0.11
GDF1P27539 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
GDF1P27539 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.39□□□□□ -0.11
GDF1P27539 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.39□□□□□ -0.11
GDF1P27539 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.39□□□□□ -0.11
GDF1P27539 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.39□□□□□ -0.11
GDF1P27539 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.39□□□□□ -0.11
GDF1P27539 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.39□□□□□ -0.11
GDF1P27539 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.39□□□□□ -0.11
GDF1P27539 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.39□□□□□ -0.11
GDF1P27539 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
GDF1P27539 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.39□□□□□ -0.11
GDF1P27539 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.39□□□□□ -0.11
GDF1P27539 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.39□□□□□ -0.11
GDF1P27539 RN7SL692P-201ENST00000464677 288 ntBASIC14.39□□□□□ -0.11
GDF1P27539 MEIS3P1-201ENST00000495167 958 ntBASIC14.39□□□□□ -0.11
GDF1P27539 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.39□□□□□ -0.11
GDF1P27539 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.39□□□□□ -0.11
GDF1P27539 AP005018.1-201ENST00000525475 301 ntBASIC14.39□□□□□ -0.11
GDF1P27539 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.39□□□□□ -0.11
GDF1P27539 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.39□□□□□ -0.11
GDF1P27539 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.39□□□□□ -0.11
GDF1P27539 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
GDF1P27539 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
GDF1P27539 AC005225.4-201ENST00000557330 545 ntBASIC14.39□□□□□ -0.11
GDF1P27539 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.39□□□□□ -0.11
GDF1P27539 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.39□□□□□ -0.11
GDF1P27539 AC007431.3-201ENST00000623221 587 ntBASIC14.39□□□□□ -0.11
GDF1P27539 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.39□□□□□ -0.11
GDF1P27539 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.39□□□□□ -0.11
GDF1P27539 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
GDF1P27539 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
GDF1P27539 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.39□□□□□ -0.11
GDF1P27539 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDF1P27539 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
GDF1P27539 AL118508.1-201ENST00000613502 2345 ntBASIC14.38□□□□□ -0.11
GDF1P27539 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
GDF1P27539 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.38□□□□□ -0.11
GDF1P27539 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.38□□□□□ -0.11
GDF1P27539 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.38□□□□□ -0.11
GDF1P27539 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
GDF1P27539 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
GDF1P27539 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.38□□□□□ -0.11
GDF1P27539 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.38□□□□□ -0.11
GDF1P27539 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.38□□□□□ -0.11
GDF1P27539 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.38□□□□□ -0.11
GDF1P27539 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.38□□□□□ -0.11
GDF1P27539 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.38□□□□□ -0.11
GDF1P27539 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.38□□□□□ -0.11
GDF1P27539 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.38□□□□□ -0.11
GDF1P27539 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
GDF1P27539 AC005034.1-201ENST00000426657 489 ntBASIC14.38□□□□□ -0.11
GDF1P27539 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.38□□□□□ -0.11
GDF1P27539 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.38□□□□□ -0.11
GDF1P27539 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
GDF1P27539 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.38□□□□□ -0.11
GDF1P27539 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
GDF1P27539 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.38□□□□□ -0.11
GDF1P27539 TP53TG3HP-202ENST00000569755 579 ntBASIC14.38□□□□□ -0.11
GDF1P27539 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.38□□□□□ -0.11
GDF1P27539 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.38□□□□□ -0.11
GDF1P27539 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.38□□□□□ -0.11
GDF1P27539 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
GDF1P27539 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms