Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
ERCC2P18074 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC2P18074 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC2P18074 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
ERCC2P18074 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
ERCC2P18074 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC2P18074 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC2P18074 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC2P18074 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC2P18074 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC2P18074 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.32■□□□□ 0.2
ERCC2P18074 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC2P18074 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.32■□□□□ 0.2
ERCC2P18074 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC2P18074 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC2P18074 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC2P18074 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC2P18074 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC2P18074 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.32■□□□□ 0.2
ERCC2P18074 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC2P18074 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.32■□□□□ 0.2
ERCC2P18074 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC2P18074 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
ERCC2P18074 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC2P18074 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC2P18074 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC2P18074 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.32■□□□□ 0.2
ERCC2P18074 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ERCC2P18074 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC2P18074 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC2P18074 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
ERCC2P18074 TARDBPP1-201ENST00000442013 1203 ntBASIC16.32■□□□□ 0.2
ERCC2P18074 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
ERCC2P18074 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC2P18074 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.32■□□□□ 0.2
ERCC2P18074 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.32■□□□□ 0.2
ERCC2P18074 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.32■□□□□ 0.2
ERCC2P18074 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC2P18074 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.32■□□□□ 0.2
ERCC2P18074 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC2P18074 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.32■□□□□ 0.2
ERCC2P18074 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.32■□□□□ 0.2
ERCC2P18074 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.32■□□□□ 0.2
ERCC2P18074 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.32■□□□□ 0.2
ERCC2P18074 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.32■□□□□ 0.2
ERCC2P18074 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC2P18074 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.32■□□□□ 0.2
ERCC2P18074 AC010336.2-201ENST00000564226 506 ntBASIC16.32■□□□□ 0.2
ERCC2P18074 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.32■□□□□ 0.2
ERCC2P18074 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC2P18074 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.32■□□□□ 0.2
ERCC2P18074 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC2P18074 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.32■□□□□ 0.2
ERCC2P18074 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.32■□□□□ 0.2
ERCC2P18074 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC2P18074 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC2P18074 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC2P18074 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC2P18074 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC2P18074 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.32■□□□□ 0.2
ERCC2P18074 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ERCC2P18074 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.32■□□□□ 0.2
ERCC2P18074 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC2P18074 AC105250.1-201ENST00000509378 2057 ntBASIC16.31■□□□□ 0.2
ERCC2P18074 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC2P18074 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC2P18074 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.31■□□□□ 0.2
ERCC2P18074 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC2P18074 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC2P18074 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.31■□□□□ 0.2
ERCC2P18074 AC020658.6-201ENST00000623564 1870 ntBASIC16.31■□□□□ 0.2
ERCC2P18074 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
ERCC2P18074 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC2P18074 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC2P18074 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC2P18074 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC2P18074 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC2P18074 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.31■□□□□ 0.2
ERCC2P18074 AC100757.3-201ENST00000622361 1406 ntBASIC16.31■□□□□ 0.2
ERCC2P18074 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.31■□□□□ 0.2
ERCC2P18074 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC2P18074 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC2P18074 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC2P18074 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ERCC2P18074 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC2P18074 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC2P18074 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ERCC2P18074 RN7SL618P-201ENST00000477850 296 ntBASIC16.31■□□□□ 0.2
ERCC2P18074 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.31■□□□□ 0.2
ERCC2P18074 IGHV3-42-201ENST00000520410 361 ntBASIC16.31■□□□□ 0.2
ERCC2P18074 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC2P18074 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.31■□□□□ 0.2
ERCC2P18074 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.31■□□□□ 0.2
ERCC2P18074 AC025048.3-201ENST00000590609 569 ntBASIC16.31■□□□□ 0.2
ERCC2P18074 AC005702.4-201ENST00000618393 416 ntBASIC16.31■□□□□ 0.2
ERCC2P18074 AL590560.3-201ENST00000623350 461 ntBASIC16.31■□□□□ 0.2
ERCC2P18074 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ERCC2P18074 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC2P18074 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
ERCC2P18074 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms