Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN2P17655 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN2P17655 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.35■□□□□ 0.53
CAPN2P17655 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN2P17655 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.35■□□□□ 0.53
CAPN2P17655 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.35■□□□□ 0.53
CAPN2P17655 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN2P17655 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN2P17655 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN2P17655 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN2P17655 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CAPN2P17655 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN2P17655 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CAPN2P17655 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN2P17655 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.35■□□□□ 0.53
CAPN2P17655 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CAPN2P17655 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN2P17655 BRWD1P1-201ENST00000401091 371 ntBASIC18.35■□□□□ 0.53
CAPN2P17655 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.35■□□□□ 0.53
CAPN2P17655 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.35■□□□□ 0.53
CAPN2P17655 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN2P17655 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.35■□□□□ 0.53
CAPN2P17655 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.35■□□□□ 0.53
CAPN2P17655 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.35■□□□□ 0.53
CAPN2P17655 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN2P17655 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN2P17655 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN2P17655 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN2P17655 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.35■□□□□ 0.53
CAPN2P17655 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN2P17655 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.35■□□□□ 0.53
CAPN2P17655 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN2P17655 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN2P17655 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.35■□□□□ 0.53
CAPN2P17655 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN2P17655 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CAPN2P17655 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.35■□□□□ 0.53
CAPN2P17655 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN2P17655 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CAPN2P17655 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN2P17655 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.35■□□□□ 0.53
CAPN2P17655 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN2P17655 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CAPN2P17655 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN2P17655 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.34■□□□□ 0.53
CAPN2P17655 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN2P17655 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN2P17655 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.34■□□□□ 0.53
CAPN2P17655 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN2P17655 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN2P17655 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN2P17655 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.34■□□□□ 0.53
CAPN2P17655 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN2P17655 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN2P17655 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.34■□□□□ 0.53
CAPN2P17655 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN2P17655 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN2P17655 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN2P17655 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN2P17655 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CAPN2P17655 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.34■□□□□ 0.53
CAPN2P17655 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
CAPN2P17655 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN2P17655 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN2P17655 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC18.34■□□□□ 0.53
CAPN2P17655 FAM21FP-201ENST00000426241 1131 ntBASIC18.34■□□□□ 0.53
CAPN2P17655 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN2P17655 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.34■□□□□ 0.53
CAPN2P17655 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC18.34■□□□□ 0.53
CAPN2P17655 SPDYE18-201ENST00000510091 1050 ntBASIC18.34■□□□□ 0.53
CAPN2P17655 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CAPN2P17655 RARRES2P5-201ENST00000564013 466 ntBASIC18.34■□□□□ 0.53
CAPN2P17655 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.34■□□□□ 0.53
CAPN2P17655 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CAPN2P17655 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN2P17655 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN2P17655 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN2P17655 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN2P17655 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN2P17655 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CAPN2P17655 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CAPN2P17655 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN2P17655 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN2P17655 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CAPN2P17655 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN2P17655 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CAPN2P17655 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.34■□□□□ 0.53
CAPN2P17655 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN2P17655 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.33■□□□□ 0.53
CAPN2P17655 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CAPN2P17655 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CAPN2P17655 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CAPN2P17655 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CAPN2P17655 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CAPN2P17655 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.33■□□□□ 0.53
CAPN2P17655 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CAPN2P17655 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CAPN2P17655 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
CAPN2P17655 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CAPN2P17655 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms