Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMPD1P17405 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMPD1P17405 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMPD1P17405 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SMPD1P17405 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMPD1P17405 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMPD1P17405 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMPD1P17405 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMPD1P17405 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
SMPD1P17405 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMPD1P17405 MIR326-201ENST00000362220 95 ntBASIC17.47■□□□□ 0.39
SMPD1P17405 MIR1247-201ENST00000408206 136 ntBASIC17.47■□□□□ 0.39
SMPD1P17405 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.47■□□□□ 0.39
SMPD1P17405 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.47■□□□□ 0.39
SMPD1P17405 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.47■□□□□ 0.39
SMPD1P17405 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.47■□□□□ 0.39
SMPD1P17405 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.47■□□□□ 0.39
SMPD1P17405 FAM86HP-204ENST00000513466 959 ntBASIC17.47■□□□□ 0.39
SMPD1P17405 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.47■□□□□ 0.39
SMPD1P17405 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.47■□□□□ 0.39
SMPD1P17405 AC023310.1-201ENST00000554836 735 ntBASIC17.47■□□□□ 0.39
SMPD1P17405 C2orf69P2-201ENST00000562032 1123 ntBASIC17.47■□□□□ 0.39
SMPD1P17405 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.47■□□□□ 0.39
SMPD1P17405 AC103810.3-201ENST00000583567 96 ntBASIC17.47■□□□□ 0.39
SMPD1P17405 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMPD1P17405 AC243960.2-201ENST00000600996 747 ntBASIC17.47■□□□□ 0.39
SMPD1P17405 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.47■□□□□ 0.39
SMPD1P17405 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.47■□□□□ 0.39
SMPD1P17405 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.47■□□□□ 0.39
SMPD1P17405 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.47■□□□□ 0.39
SMPD1P17405 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMPD1P17405 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SMPD1P17405 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.47■□□□□ 0.39
SMPD1P17405 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMPD1P17405 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMPD1P17405 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMPD1P17405 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SMPD1P17405 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMPD1P17405 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMPD1P17405 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.47■□□□□ 0.39
SMPD1P17405 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMPD1P17405 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMPD1P17405 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMPD1P17405 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.47■□□□□ 0.39
SMPD1P17405 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMPD1P17405 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.47■□□□□ 0.39
SMPD1P17405 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.47■□□□□ 0.39
SMPD1P17405 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.47■□□□□ 0.39
SMPD1P17405 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SMPD1P17405 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMPD1P17405 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SMPD1P17405 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMPD1P17405 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.46■□□□□ 0.39
SMPD1P17405 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMPD1P17405 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMPD1P17405 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.46■□□□□ 0.39
SMPD1P17405 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMPD1P17405 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMPD1P17405 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMPD1P17405 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.46■□□□□ 0.39
SMPD1P17405 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.46■□□□□ 0.39
SMPD1P17405 KRT18P25-201ENST00000508931 1278 ntBASIC17.46■□□□□ 0.39
SMPD1P17405 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
SMPD1P17405 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.46■□□□□ 0.39
SMPD1P17405 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMPD1P17405 AC084346.2-201ENST00000607097 949 ntBASIC17.46■□□□□ 0.39
SMPD1P17405 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMPD1P17405 AC138951.2-201ENST00000623455 1161 ntBASIC17.46■□□□□ 0.39
SMPD1P17405 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMPD1P17405 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMPD1P17405 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
SMPD1P17405 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.46■□□□□ 0.39
SMPD1P17405 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMPD1P17405 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.46■□□□□ 0.38
SMPD1P17405 KRT8P35-201ENST00000483942 1338 ntBASIC17.46■□□□□ 0.38
SMPD1P17405 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMPD1P17405 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMPD1P17405 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.45■□□□□ 0.38
SMPD1P17405 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.45■□□□□ 0.38
SMPD1P17405 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SMPD1P17405 AL662844.4-201ENST00000606367 2838 ntBASIC17.45■□□□□ 0.38
SMPD1P17405 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SMPD1P17405 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMPD1P17405 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMPD1P17405 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMPD1P17405 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SMPD1P17405 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SMPD1P17405 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMPD1P17405 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMPD1P17405 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.45■□□□□ 0.38
SMPD1P17405 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SMPD1P17405 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMPD1P17405 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMPD1P17405 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMPD1P17405 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMPD1P17405 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.45■□□□□ 0.38
SMPD1P17405 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SMPD1P17405 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMPD1P17405 GPAA1P2-201ENST00000417923 928 ntBASIC17.45■□□□□ 0.38
SMPD1P17405 GOLGA2P4-201ENST00000441462 777 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms