Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CNOT4O95628 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNOT4O95628 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNOT4O95628 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.18□□□□□ -0.14
CNOT4O95628 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.18□□□□□ -0.14
CNOT4O95628 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.18□□□□□ -0.14
CNOT4O95628 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNOT4O95628 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNOT4O95628 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNOT4O95628 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CNOT4O95628 AC092171.3-201ENST00000610122 2651 ntBASIC14.18□□□□□ -0.14
CNOT4O95628 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CNOT4O95628 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.17□□□□□ -0.14
CNOT4O95628 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT4O95628 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT4O95628 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.17□□□□□ -0.14
CNOT4O95628 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.17□□□□□ -0.14
CNOT4O95628 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT4O95628 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT4O95628 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT4O95628 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT4O95628 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.17□□□□□ -0.14
CNOT4O95628 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT4O95628 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT4O95628 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CNOT4O95628 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.17□□□□□ -0.14
CNOT4O95628 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.17□□□□□ -0.14
CNOT4O95628 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT4O95628 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
CNOT4O95628 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.17□□□□□ -0.14
CNOT4O95628 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT4O95628 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT4O95628 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT4O95628 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT4O95628 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT4O95628 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.17□□□□□ -0.14
CNOT4O95628 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.17□□□□□ -0.14
CNOT4O95628 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.17□□□□□ -0.14
CNOT4O95628 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.17□□□□□ -0.14
CNOT4O95628 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.17□□□□□ -0.14
CNOT4O95628 CRB3P1-201ENST00000449338 276 ntBASIC14.17□□□□□ -0.14
CNOT4O95628 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.17□□□□□ -0.14
CNOT4O95628 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.17□□□□□ -0.14
CNOT4O95628 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.17□□□□□ -0.14
CNOT4O95628 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.17□□□□□ -0.14
CNOT4O95628 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.17□□□□□ -0.14
CNOT4O95628 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CNOT4O95628 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.17□□□□□ -0.14
CNOT4O95628 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.17□□□□□ -0.14
CNOT4O95628 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.17□□□□□ -0.14
CNOT4O95628 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.17□□□□□ -0.14
CNOT4O95628 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CNOT4O95628 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.17□□□□□ -0.14
CNOT4O95628 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.17□□□□□ -0.14
CNOT4O95628 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT4O95628 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
CNOT4O95628 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.17□□□□□ -0.14
CNOT4O95628 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CNOT4O95628 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.17□□□□□ -0.14
CNOT4O95628 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT4O95628 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT4O95628 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CNOT4O95628 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
CNOT4O95628 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT4O95628 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
CNOT4O95628 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
CNOT4O95628 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CNOT4O95628 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CNOT4O95628 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.17□□□□□ -0.14
CNOT4O95628 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
CNOT4O95628 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.17□□□□□ -0.14
CNOT4O95628 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CNOT4O95628 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
CNOT4O95628 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
CNOT4O95628 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT4O95628 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CNOT4O95628 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT4O95628 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CNOT4O95628 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.16□□□□□ -0.14
CNOT4O95628 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT4O95628 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.16□□□□□ -0.14
CNOT4O95628 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT4O95628 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
CNOT4O95628 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CNOT4O95628 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.16□□□□□ -0.14
CNOT4O95628 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CNOT4O95628 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.16□□□□□ -0.14
CNOT4O95628 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.16□□□□□ -0.14
CNOT4O95628 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.16□□□□□ -0.14
CNOT4O95628 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.16□□□□□ -0.14
CNOT4O95628 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.16□□□□□ -0.14
CNOT4O95628 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.16□□□□□ -0.14
CNOT4O95628 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.16□□□□□ -0.14
CNOT4O95628 RN7SL618P-201ENST00000477850 296 ntBASIC14.16□□□□□ -0.14
CNOT4O95628 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.16□□□□□ -0.14
CNOT4O95628 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.16□□□□□ -0.14
CNOT4O95628 AL008721.1-201ENST00000609964 604 ntBASIC14.16□□□□□ -0.14
CNOT4O95628 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
CNOT4O95628 AL033527.5-202ENST00000641632 1098 ntBASIC14.16□□□□□ -0.14
CNOT4O95628 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms