Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LTN1O94822 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LTN1O94822 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LTN1O94822 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC20.57■□□□□ 0.88
LTN1O94822 HIST2H2BB-201ENST00000449108 381 ntBASIC20.57■□□□□ 0.88
LTN1O94822 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC20.57■□□□□ 0.88
LTN1O94822 AP001258.2-201ENST00000529891 490 ntBASIC20.57■□□□□ 0.88
LTN1O94822 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC20.57■□□□□ 0.88
LTN1O94822 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC20.57■□□□□ 0.88
LTN1O94822 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC20.57■□□□□ 0.88
LTN1O94822 NDUFV2P1-201ENST00000596415 907 ntBASIC20.57■□□□□ 0.88
LTN1O94822 ZACNP1-201ENST00000612259 710 ntBASIC20.57■□□□□ 0.88
LTN1O94822 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC20.57■□□□□ 0.88
LTN1O94822 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
LTN1O94822 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.57■□□□□ 0.88
LTN1O94822 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LTN1O94822 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LTN1O94822 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LTN1O94822 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
LTN1O94822 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LTN1O94822 ILF3-AS1-201ENST00000591501 1983 ntBASIC20.57■□□□□ 0.88
LTN1O94822 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LTN1O94822 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LTN1O94822 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.57■□□□□ 0.88
LTN1O94822 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC20.57■□□□□ 0.88
LTN1O94822 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
LTN1O94822 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
LTN1O94822 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC20.57■□□□□ 0.88
LTN1O94822 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LTN1O94822 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LTN1O94822 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LTN1O94822 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LTN1O94822 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LTN1O94822 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LTN1O94822 SLC25A24P2-201ENST00000415059 510 ntBASIC20.57■□□□□ 0.88
LTN1O94822 HLA-K-203ENST00000430151 1046 ntBASIC20.57■□□□□ 0.88
LTN1O94822 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LTN1O94822 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC20.57■□□□□ 0.88
LTN1O94822 ADM-202ENST00000524948 584 ntTSL 2 BASIC20.57■□□□□ 0.88
LTN1O94822 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC20.57■□□□□ 0.88
LTN1O94822 RNF41-210ENST00000552244 716 ntTSL 3 BASIC20.57■□□□□ 0.88
LTN1O94822 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC20.57■□□□□ 0.88
LTN1O94822 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
LTN1O94822 AC138649.2-201ENST00000615886 705 ntBASIC20.57■□□□□ 0.88
LTN1O94822 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LTN1O94822 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LTN1O94822 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
LTN1O94822 BLK-205ENST00000529894 2017 ntTSL 5 BASIC20.56■□□□□ 0.88
LTN1O94822 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
LTN1O94822 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LTN1O94822 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LTN1O94822 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LTN1O94822 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC20.56■□□□□ 0.88
LTN1O94822 AC007787.1-201ENST00000588095 1583 ntBASIC20.56■□□□□ 0.88
LTN1O94822 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LTN1O94822 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.56■□□□□ 0.88
LTN1O94822 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LTN1O94822 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LTN1O94822 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.56■□□□□ 0.88
LTN1O94822 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LTN1O94822 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.56■□□□□ 0.88
LTN1O94822 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
LTN1O94822 NDUFAB1P1-201ENST00000404262 460 ntBASIC20.56■□□□□ 0.88
LTN1O94822 AC114812.1-204ENST00000449669 728 ntBASIC20.56■□□□□ 0.88
LTN1O94822 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC20.56■□□□□ 0.88
LTN1O94822 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC20.56■□□□□ 0.88
LTN1O94822 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC20.56■□□□□ 0.88
LTN1O94822 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC20.56■□□□□ 0.88
LTN1O94822 NAT9-222ENST00000583476 583 ntTSL 3 BASIC20.56■□□□□ 0.88
LTN1O94822 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LTN1O94822 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LTN1O94822 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LTN1O94822 AC015818.8-201ENST00000587907 1519 ntBASIC20.56■□□□□ 0.88
LTN1O94822 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LTN1O94822 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LTN1O94822 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.56■□□□□ 0.88
LTN1O94822 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LTN1O94822 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
LTN1O94822 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LTN1O94822 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LTN1O94822 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LTN1O94822 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
LTN1O94822 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.55■□□□□ 0.88
LTN1O94822 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC20.55■□□□□ 0.88
LTN1O94822 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC20.55■□□□□ 0.88
LTN1O94822 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC20.55■□□□□ 0.88
LTN1O94822 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LTN1O94822 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC20.55■□□□□ 0.88
LTN1O94822 AL645937.2-201ENST00000396808 931 ntBASIC20.55■□□□□ 0.88
LTN1O94822 HLA-DPB2-205ENST00000435074 1188 ntBASIC20.55■□□□□ 0.88
LTN1O94822 POM121L10P-201ENST00000436994 1285 ntBASIC20.55■□□□□ 0.88
LTN1O94822 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC20.55■□□□□ 0.88
LTN1O94822 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LTN1O94822 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC20.55■□□□□ 0.88
LTN1O94822 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC20.55■□□□□ 0.88
LTN1O94822 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LTN1O94822 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LTN1O94822 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LTN1O94822 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
LTN1O94822 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms